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Predicting the need for a reduced drug dose, at first prescription
Prescribing the right drug with the right dose is a central tenet of precision medicine. We examined the use of patients’ prior Electronic Health Records to predict a reduction in drug dosage. We focus on drugs that interact with the P450 enzyme family, because their dosage is known to be sensitive...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6197198/ https://www.ncbi.nlm.nih.gov/pubmed/30349060 http://dx.doi.org/10.1038/s41598-018-33980-0 |
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author | Coulet, Adrien Shah, Nigam H. Wack, Maxime Chawki, Mohammad B. Jay, Nicolas Dumontier, Michel |
author_facet | Coulet, Adrien Shah, Nigam H. Wack, Maxime Chawki, Mohammad B. Jay, Nicolas Dumontier, Michel |
author_sort | Coulet, Adrien |
collection | PubMed |
description | Prescribing the right drug with the right dose is a central tenet of precision medicine. We examined the use of patients’ prior Electronic Health Records to predict a reduction in drug dosage. We focus on drugs that interact with the P450 enzyme family, because their dosage is known to be sensitive and variable. We extracted diagnostic codes, conditions reported in clinical notes, and laboratory orders from Stanford’s clinical data warehouse to construct cohorts of patients that either did or did not need a dose change. After feature selection, we trained models to predict the patients who will (or will not) require a dose change after being prescribed one of 34 drugs across 23 drug classes. Overall, we can predict (AUC ≥ 0.70–0.95) a dose reduction for 23 drugs and 22 drug classes. Several of these drugs are associated with clinical guidelines that recommend dose reduction exclusively in the case of adverse reaction. For these cases, a reduction in dosage may be considered as a surrogate for an adverse reaction, which our system could indirectly help predict and prevent. Our study illustrates the role machine learning may take in providing guidance in setting the starting dose for drugs associated with response variability. |
format | Online Article Text |
id | pubmed-6197198 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-61971982018-10-24 Predicting the need for a reduced drug dose, at first prescription Coulet, Adrien Shah, Nigam H. Wack, Maxime Chawki, Mohammad B. Jay, Nicolas Dumontier, Michel Sci Rep Article Prescribing the right drug with the right dose is a central tenet of precision medicine. We examined the use of patients’ prior Electronic Health Records to predict a reduction in drug dosage. We focus on drugs that interact with the P450 enzyme family, because their dosage is known to be sensitive and variable. We extracted diagnostic codes, conditions reported in clinical notes, and laboratory orders from Stanford’s clinical data warehouse to construct cohorts of patients that either did or did not need a dose change. After feature selection, we trained models to predict the patients who will (or will not) require a dose change after being prescribed one of 34 drugs across 23 drug classes. Overall, we can predict (AUC ≥ 0.70–0.95) a dose reduction for 23 drugs and 22 drug classes. Several of these drugs are associated with clinical guidelines that recommend dose reduction exclusively in the case of adverse reaction. For these cases, a reduction in dosage may be considered as a surrogate for an adverse reaction, which our system could indirectly help predict and prevent. Our study illustrates the role machine learning may take in providing guidance in setting the starting dose for drugs associated with response variability. Nature Publishing Group UK 2018-10-22 /pmc/articles/PMC6197198/ /pubmed/30349060 http://dx.doi.org/10.1038/s41598-018-33980-0 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Coulet, Adrien Shah, Nigam H. Wack, Maxime Chawki, Mohammad B. Jay, Nicolas Dumontier, Michel Predicting the need for a reduced drug dose, at first prescription |
title | Predicting the need for a reduced drug dose, at first prescription |
title_full | Predicting the need for a reduced drug dose, at first prescription |
title_fullStr | Predicting the need for a reduced drug dose, at first prescription |
title_full_unstemmed | Predicting the need for a reduced drug dose, at first prescription |
title_short | Predicting the need for a reduced drug dose, at first prescription |
title_sort | predicting the need for a reduced drug dose, at first prescription |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6197198/ https://www.ncbi.nlm.nih.gov/pubmed/30349060 http://dx.doi.org/10.1038/s41598-018-33980-0 |
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