Cargando…

Unexpected Evolution of Lesion-Recognition Modules in Eukaryotic NER and Kinetoplast DNA Dynamics Proteins from Bacterial Mobile Elements

The provenance of several components of major uniquely eukaryotic molecular machines are increasingly being traced back to prokaryotic biological conflict systems. Here, we demonstrate that the N-terminal single-stranded DNA-binding domain from the anti-restriction protein ArdC, deployed by bacteria...

Descripción completa

Detalles Bibliográficos
Autores principales:	Krishnan, Arunkumar, Burroughs, A. Maxwell, Iyer, Lakshminarayan M., Aravind, L.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Elsevier 2018
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6222260/ https://www.ncbi.nlm.nih.gov/pubmed/30396152 http://dx.doi.org/10.1016/j.isci.2018.10.017

Ejemplares similares

Two novel PIWI families: roles in inter-genomic conflicts in bacteria and Mediator-dependent modulation of transcription in eukaryotes
por: Burroughs, A Maxwell, et al.
Publicado: (2013)

Functional Innovation in the Evolution of the Calcium-Dependent System of the Eukaryotic Endoplasmic Reticulum
por: Schäffer, Daniel E., et al.
Publicado: (2020)

Jumbo Phages: A Comparative Genomic Overview of Core Functions and Adaptions for Biological Conflicts
por: M. Iyer, Lakshminarayan, et al.
Publicado: (2021)

Transposons to toxins: the provenance, architecture and diversification of a widespread class of eukaryotic effectors
por: Zhang, Dapeng, et al.
Publicado: (2016)

Bacterial death and TRADD-N domains help define novel apoptosis and immunity mechanisms shared by prokaryotes and metazoans
por: Kaur, Gurmeet, et al.
Publicado: (2021)

Novel clades of the HU/IHF superfamily point to unexpected roles in the eukaryotic centrosome, chromosome partitioning, and biologic conflicts
por: Burroughs, A. Maxwell, et al.
Publicado: (2017)

Polyvalent Proteins, a Pervasive Theme in the Intergenomic Biological Conflicts of Bacteriophages and Conjugative Elements
por: Iyer, Lakshminarayan M., et al.
Publicado: (2017)

A novel immunity system for bacterial nucleic acid degrading toxins and its recruitment in various eukaryotic and DNA viral systems
por: Zhang, Dapeng, et al.
Publicado: (2011)

Novel autoproteolytic and DNA-damage sensing components in the bacterial SOS response and oxidized methylcytosine-induced eukaryotic DNA demethylation systems
por: Aravind, L, et al.
Publicado: (2013)

The prokaryotic antecedents of the ubiquitin-signaling system and the early evolution of ubiquitin-like β-grasp domains
por: Iyer, Lakshminarayan M, et al.
Publicado: (2006)

A novel superfamily containing the β-grasp fold involved in binding diverse soluble ligands
por: Burroughs, A Maxwell, et al.
Publicado: (2007)

Small but versatile: the extraordinary functional and structural diversity of the β-grasp fold
por: Burroughs, A Maxwell, et al.
Publicado: (2007)

Evolution of the deaminase fold and multiple origins of eukaryotic editing and mutagenic nucleic acid deaminases from bacterial toxin systems
por: Iyer, Lakshminarayan M., et al.
Publicado: (2011)

Computational identification of novel biochemical systems involved in oxidation, glycosylation and other complex modifications of bases in DNA
por: Iyer, Lakshminarayan M., et al.
Publicado: (2013)

Highly regulated, diversifying NTP-dependent biological conflict systems with implications for the emergence of multicellularity
por: Kaur, Gurmeet, et al.
Publicado: (2020)

Apprehending the NAD(+)–ADPr-Dependent Systems in the Virus World
por: Iyer, Lakshminarayan M., et al.
Publicado: (2022)

HPC2 and ubinuclein define a novel family of histone chaperones conserved throughout eukaryotes
por: Balaji, S., et al.
Publicado: (2009)

MutL homologs in restriction-modification systems and the origin of eukaryotic MORC ATPases
por: Iyer, Lakshminarayan M, et al.
Publicado: (2008)

Adenine methylation in eukaryotes: Apprehending the complex evolutionary history and functional potential of an epigenetic modification
por: Iyer, Lakshminarayan M., et al.
Publicado: (2015)

KINETOPLAST AND OTHER SATELLITE DNAs OF KINETOPLASTIC AND DYSKINETOPLASTIC STRAINS OF TRYPANOSOMA
por: Renger, Harmut C., et al.
Publicado: (1971)

Unraveling the biochemistry and provenance of pupylation: a prokaryotic analog of ubiquitination
por: Iyer, Lakshminarayan M, et al.
Publicado: (2008)

EVIDENCE FOR THE RETENTION OF KINETOPLAST DNA IN AN ACRIFLAVINE-INDUCED DYSKINETOPLASTIC STRAIN OF TRYPANOSOMA BRUCEI WHICH REPLICATES THE ALTERED CENTRAL ELEMENT OF THE KINETOPLAST
por: Stuart, K. D.
Publicado: (1971)

DroNER: Dataset for drone named entity recognition
por: Silalahi, Swardiantara, et al.
Publicado: (2023)

Discovery of Novel DENN Proteins: Implications for the Evolution of Eukaryotic Intracellular Membrane Structures and Human Disease
por: Zhang, Dapeng, et al.
Publicado: (2012)

Evolutionary convergence and divergence in archaeal chromosomal proteins and Chromo-like domains from bacteria and eukaryotes
por: Kaur, Gurmeet, et al.
Publicado: (2018)

Diversification of AID/APOBEC-like deaminases in metazoa: multiplicity of clades and widespread roles in immunity
por: Krishnan, Arunkumar, et al.
Publicado: (2018)

Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling
por: Burroughs, A. Maxwell, et al.
Publicado: (2015)

Gene flow and biological conflict systems in the origin and evolution of eukaryotes
por: Aravind, L., et al.
Publicado: (2012)

Evolutionary connection between the catalytic subunits of DNA-dependent RNA polymerases and eukaryotic RNA-dependent RNA polymerases and the origin of RNA polymerases
por: Iyer, Lakshminarayan M, et al.
Publicado: (2003)

The kinetoplast in the diagnosis of visceral leishmaniasis
por: Murray, Henry W.
Publicado: (2022)

EFFECT OF ACRIFLAVIN ON THE KINETOPLAST OF LEISHMANIA TARENTOLAE : Mode of Action and Physiological Correlates of the Loss of Kinetoplast DNA
por: Simpson, Larry
Publicado: (1968)

Structure and stability of DNA containing an aristolactam II-dA lesion: implications for the NER recognition of bulky adducts
por: Lukin, Mark, et al.
Publicado: (2012)

Origin and evolution of the archaeo-eukaryotic primase superfamily and related palm-domain proteins: structural insights and new members
por: Iyer, Lakshminarayan M., et al.
Publicado: (2005)

Radically different maxicircle classes within the same kinetoplast: an artefact or a novel feature of the kinetoplast genome?
por: Flegontov, Pavel N, et al.
Publicado: (2006)

Bulky Adducts in Clustered DNA Lesions: Causes of Resistance to the NER System
por: Naumenko, N. V., et al.
Publicado: (2022)

The eukaryotic translation initiation regulator CDC123 defines a divergent clade of ATP-grasp enzymes with a predicted role in novel protein modifications
por: Burroughs, A Maxwell, et al.
Publicado: (2015)

The structure of replicating kinetoplast DNA networks
Publicado: (1993)

THE FORM AND STRUCTURE OF KINETOPLAST DNA OF CRITHIDIA
por: Renger, Hartmut C., et al.
Publicado: (1972)

Ancient conserved domains shared by animal soluble guanylyl cyclases and bacterial signaling proteins
por: Iyer, Lakshminarayan M, et al.
Publicado: (2003)

TrigNER: automatically optimized biomedical event trigger recognition on scientific documents
por: Campos, David, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_88hc75f9n6cnqb3i8higvg2s93