Cargando…
Synthetic protein alignments by CCMgen quantify noise in residue-residue contact prediction
Compensatory mutations between protein residues in physical contact can manifest themselves as statistical couplings between the corresponding columns in a multiple sequence alignment (MSA) of the protein family. Conversely, large coupling coefficients predict residue contacts. Methods for de-novo p...
Autores principales: | Vorberg, Susann, Seemayer, Stefan, Söding, Johannes |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6237422/ https://www.ncbi.nlm.nih.gov/pubmed/30395601 http://dx.doi.org/10.1371/journal.pcbi.1006526 |
Ejemplares similares
-
CCMpred—fast and precise prediction of protein residue–residue contacts from correlated mutations
por: Seemayer, Stefan, et al.
Publicado: (2014) -
CAB-Align: A Flexible Protein Structure Alignment Method Based on the Residue-Residue Contact Area
por: Terashi, Genki, et al.
Publicado: (2015) -
Characteristics of protein residue-residue contacts and their application in contact prediction
por: Wozniak, Pawel P., et al.
Publicado: (2014) -
MSACompro: protein multiple sequence alignment using predicted secondary structure, solvent accessibility, and residue-residue contacts
por: Deng, Xin, et al.
Publicado: (2011) -
Accurate prediction of inter-protein residue–residue contacts for homo-oligomeric protein complexes
por: Yan, Yumeng, et al.
Publicado: (2021)