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KrakenUniq: confident and fast metagenomics classification using unique k-mer counts

False-positive identifications are a significant problem in metagenomics classification. We present KrakenUniq, a novel metagenomics classifier that combines the fast k-mer-based classification of Kraken with an efficient algorithm for assessing the coverage of unique k-mers found in each species in...

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Detalles Bibliográficos
Autores principales: Breitwieser, F. P., Baker, D. N., Salzberg, S. L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6238331/
https://www.ncbi.nlm.nih.gov/pubmed/30445993
http://dx.doi.org/10.1186/s13059-018-1568-0