SWIFOLD: Smith-Waterman implementation on FPGA with OpenCL for long DNA sequences

BACKGROUND: The Smith-Waterman (SW) algorithm is the best choice for searching similar regions between two DNA or protein sequences. However, it may become impracticable in some contexts due to its high computational demands. Consequently, the computer science community has focused on the use of mod...

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Detalles Bibliográficos
Autores principales: Rucci, Enzo, Garcia, Carlos, Botella, Guillermo, De Giusti, Armando, Naiouf, Marcelo, Prieto-Matias, Manuel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6245597/
https://www.ncbi.nlm.nih.gov/pubmed/30458766
http://dx.doi.org/10.1186/s12918-018-0614-6

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6245597/
https://www.ncbi.nlm.nih.gov/pubmed/30458766
http://dx.doi.org/10.1186/s12918-018-0614-6

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