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SWIFOLD: Smith-Waterman implementation on FPGA with OpenCL for long DNA sequences
BACKGROUND: The Smith-Waterman (SW) algorithm is the best choice for searching similar regions between two DNA or protein sequences. However, it may become impracticable in some contexts due to its high computational demands. Consequently, the computer science community has focused on the use of mod...
Autores principales: | Rucci, Enzo, Garcia, Carlos, Botella, Guillermo, De Giusti, Armando, Naiouf, Marcelo, Prieto-Matias, Manuel |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6245597/ https://www.ncbi.nlm.nih.gov/pubmed/30458766 http://dx.doi.org/10.1186/s12918-018-0614-6 |
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