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Evolution of weak cooperative interactions for biological specificity
A hallmark of biological systems is that particular functions and outcomes are realized in specific contexts, such as when particular signals are received. One mechanism for mediating specificity is described by Fisher’s “lock and key” metaphor, exemplified by enzymes that bind selectively to a part...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6255166/ https://www.ncbi.nlm.nih.gov/pubmed/30404915 http://dx.doi.org/10.1073/pnas.1815912115 |
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author | Gao, Ang Shrinivas, Krishna Lepeudry, Paul Suzuki, Hiroshi I. Sharp, Phillip A. Chakraborty, Arup K. |
author_facet | Gao, Ang Shrinivas, Krishna Lepeudry, Paul Suzuki, Hiroshi I. Sharp, Phillip A. Chakraborty, Arup K. |
author_sort | Gao, Ang |
collection | PubMed |
description | A hallmark of biological systems is that particular functions and outcomes are realized in specific contexts, such as when particular signals are received. One mechanism for mediating specificity is described by Fisher’s “lock and key” metaphor, exemplified by enzymes that bind selectively to a particular substrate via specific finely tuned interactions. Another mechanism, more prevalent in multicellular organisms, relies on multivalent weak cooperative interactions. Its importance has recently been illustrated by the recognition that liquid-liquid phase transitions underlie the formation of membraneless condensates that perform specific cellular functions. Based on computer simulations of an evolutionary model, we report that the latter mechanism likely became evolutionarily prominent when a large number of tasks had to be performed specifically for organisms to function properly. We find that the emergence of weak cooperative interactions for mediating specificity results in organisms that can evolve to accomplish new tasks with fewer, and likely less lethal, mutations. We argue that this makes the system more capable of undergoing evolutionary changes robustly, and thus this mechanism has been repeatedly positively selected in increasingly complex organisms. Specificity mediated by weak cooperative interactions results in some useful cross-reactivity for related tasks, but at the same time increases susceptibility to misregulation that might lead to pathologies. |
format | Online Article Text |
id | pubmed-6255166 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-62551662018-11-30 Evolution of weak cooperative interactions for biological specificity Gao, Ang Shrinivas, Krishna Lepeudry, Paul Suzuki, Hiroshi I. Sharp, Phillip A. Chakraborty, Arup K. Proc Natl Acad Sci U S A PNAS Plus A hallmark of biological systems is that particular functions and outcomes are realized in specific contexts, such as when particular signals are received. One mechanism for mediating specificity is described by Fisher’s “lock and key” metaphor, exemplified by enzymes that bind selectively to a particular substrate via specific finely tuned interactions. Another mechanism, more prevalent in multicellular organisms, relies on multivalent weak cooperative interactions. Its importance has recently been illustrated by the recognition that liquid-liquid phase transitions underlie the formation of membraneless condensates that perform specific cellular functions. Based on computer simulations of an evolutionary model, we report that the latter mechanism likely became evolutionarily prominent when a large number of tasks had to be performed specifically for organisms to function properly. We find that the emergence of weak cooperative interactions for mediating specificity results in organisms that can evolve to accomplish new tasks with fewer, and likely less lethal, mutations. We argue that this makes the system more capable of undergoing evolutionary changes robustly, and thus this mechanism has been repeatedly positively selected in increasingly complex organisms. Specificity mediated by weak cooperative interactions results in some useful cross-reactivity for related tasks, but at the same time increases susceptibility to misregulation that might lead to pathologies. National Academy of Sciences 2018-11-20 2018-11-07 /pmc/articles/PMC6255166/ /pubmed/30404915 http://dx.doi.org/10.1073/pnas.1815912115 Text en Copyright © 2018 the Author(s). Published by PNAS. http://creativecommons.org/licenses/by/4.0/ This open access article is distributed under Creative Commons Attribution License 4.0 (CC BY) (http://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | PNAS Plus Gao, Ang Shrinivas, Krishna Lepeudry, Paul Suzuki, Hiroshi I. Sharp, Phillip A. Chakraborty, Arup K. Evolution of weak cooperative interactions for biological specificity |
title | Evolution of weak cooperative interactions for biological specificity |
title_full | Evolution of weak cooperative interactions for biological specificity |
title_fullStr | Evolution of weak cooperative interactions for biological specificity |
title_full_unstemmed | Evolution of weak cooperative interactions for biological specificity |
title_short | Evolution of weak cooperative interactions for biological specificity |
title_sort | evolution of weak cooperative interactions for biological specificity |
topic | PNAS Plus |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6255166/ https://www.ncbi.nlm.nih.gov/pubmed/30404915 http://dx.doi.org/10.1073/pnas.1815912115 |
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