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A genome-wide dsRNA library screen for Drosophila genes that regulate the GBP/phospholipase C signaling axis that links inflammation to aging
OBJECTIVE: Invertebrates are productive models for understanding how inflammation, metabolism and aging are intertwined. We have deployed a dsRNA library screen to search for genes in Drosophila melanogaster—and hence identify human orthologs—that encode participants in a G-protein coupled, Ca(2+)-s...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6293519/ https://www.ncbi.nlm.nih.gov/pubmed/30545410 http://dx.doi.org/10.1186/s13104-018-3996-z |
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author | Sung, Eui Jae Shears, Stephen B. |
author_facet | Sung, Eui Jae Shears, Stephen B. |
author_sort | Sung, Eui Jae |
collection | PubMed |
description | OBJECTIVE: Invertebrates are productive models for understanding how inflammation, metabolism and aging are intertwined. We have deployed a dsRNA library screen to search for genes in Drosophila melanogaster—and hence identify human orthologs—that encode participants in a G-protein coupled, Ca(2+)-signaling pathway that regulates inflammation, metabolism and lifespan. RESULTS: We analyzed receptor-dependent, phospholipase C/Ca(2+) signaling responses to the growth-blocking peptide (GBP) cytokine in Drosophila S3 cells plated in 384-well plates containing dsRNAs that target approximately 14,000 Drosophila genes. We used Z-scores of < − 3 or > + 3 to define gene hits. Filtering of ‘housekeeping’ genes from these hits yielded a total of 82 and 61 Drosophila genes that either down-regulate or up-regulate Ca(2+)-signaling, respectively; representatives from these two groups were validated. Human orthologs of our hits may be modulators of Ca(2+) signaling in general, as well as being candidates for acting in molecular pathways that interconnect aging and inflammation. |
format | Online Article Text |
id | pubmed-6293519 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-62935192018-12-17 A genome-wide dsRNA library screen for Drosophila genes that regulate the GBP/phospholipase C signaling axis that links inflammation to aging Sung, Eui Jae Shears, Stephen B. BMC Res Notes Research Note OBJECTIVE: Invertebrates are productive models for understanding how inflammation, metabolism and aging are intertwined. We have deployed a dsRNA library screen to search for genes in Drosophila melanogaster—and hence identify human orthologs—that encode participants in a G-protein coupled, Ca(2+)-signaling pathway that regulates inflammation, metabolism and lifespan. RESULTS: We analyzed receptor-dependent, phospholipase C/Ca(2+) signaling responses to the growth-blocking peptide (GBP) cytokine in Drosophila S3 cells plated in 384-well plates containing dsRNAs that target approximately 14,000 Drosophila genes. We used Z-scores of < − 3 or > + 3 to define gene hits. Filtering of ‘housekeeping’ genes from these hits yielded a total of 82 and 61 Drosophila genes that either down-regulate or up-regulate Ca(2+)-signaling, respectively; representatives from these two groups were validated. Human orthologs of our hits may be modulators of Ca(2+) signaling in general, as well as being candidates for acting in molecular pathways that interconnect aging and inflammation. BioMed Central 2018-12-13 /pmc/articles/PMC6293519/ /pubmed/30545410 http://dx.doi.org/10.1186/s13104-018-3996-z Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Note Sung, Eui Jae Shears, Stephen B. A genome-wide dsRNA library screen for Drosophila genes that regulate the GBP/phospholipase C signaling axis that links inflammation to aging |
title | A genome-wide dsRNA library screen for Drosophila genes that regulate the GBP/phospholipase C signaling axis that links inflammation to aging |
title_full | A genome-wide dsRNA library screen for Drosophila genes that regulate the GBP/phospholipase C signaling axis that links inflammation to aging |
title_fullStr | A genome-wide dsRNA library screen for Drosophila genes that regulate the GBP/phospholipase C signaling axis that links inflammation to aging |
title_full_unstemmed | A genome-wide dsRNA library screen for Drosophila genes that regulate the GBP/phospholipase C signaling axis that links inflammation to aging |
title_short | A genome-wide dsRNA library screen for Drosophila genes that regulate the GBP/phospholipase C signaling axis that links inflammation to aging |
title_sort | genome-wide dsrna library screen for drosophila genes that regulate the gbp/phospholipase c signaling axis that links inflammation to aging |
topic | Research Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6293519/ https://www.ncbi.nlm.nih.gov/pubmed/30545410 http://dx.doi.org/10.1186/s13104-018-3996-z |
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