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FORGe: prioritizing variants for graph genomes

There is growing interest in using genetic variants to augment the reference genome into a graph genome, with alternative sequences, to improve read alignment accuracy and reduce allelic bias. While adding a variant has the positive effect of removing an undesirable alignment score penalty, it also...

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Detalles Bibliográficos
Autores principales: Pritt, Jacob, Chen, Nae-Chyun, Langmead, Ben
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6296055/
https://www.ncbi.nlm.nih.gov/pubmed/30558649
http://dx.doi.org/10.1186/s13059-018-1595-x