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Validation of a novel single‐drop rapid human leukocyte antigen‐DQ2/‐DQ8 typing method to identify subjects susceptible to celiac disease
BACKGROUND AND AIM: Human leukocyte antigen (HLA)‐DQ2 and/or ‐DQ8 is an essential risk factor for celiac disease (CD). About 90–95% of patients with CD carry HLA‐DQ2/‐DQ8 alleles, and HLA‐DQ typing is considered an additional diagnostic test. Conventional polymerase chain reaction (PCR)‐based HLA‐DQ...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Wiley Publishing Asia Pty Ltd
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6308057/ https://www.ncbi.nlm.nih.gov/pubmed/30619943 http://dx.doi.org/10.1002/jgh3.12090 |
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author | Verma, Anil K Singh, Alka Gatti, Simona Lionetti, Elena Galeazzi, Tiziana Monachesi, Chiara Franceschini, Elisa Ahuja, Vineet Catassi, Carlo Makharia, Govind K |
author_facet | Verma, Anil K Singh, Alka Gatti, Simona Lionetti, Elena Galeazzi, Tiziana Monachesi, Chiara Franceschini, Elisa Ahuja, Vineet Catassi, Carlo Makharia, Govind K |
author_sort | Verma, Anil K |
collection | PubMed |
description | BACKGROUND AND AIM: Human leukocyte antigen (HLA)‐DQ2 and/or ‐DQ8 is an essential risk factor for celiac disease (CD). About 90–95% of patients with CD carry HLA‐DQ2/‐DQ8 alleles, and HLA‐DQ typing is considered an additional diagnostic test. Conventional polymerase chain reaction (PCR)‐based HLA‐DQ typing methods are expensive, complex, and a time‐consuming process. We assessed the efficacy of a novel HLA‐DQ typing method, “Celiac Gene Screen,” for the detection of CD‐associated HLA haplotypes. METHODS: To assess the diagnostic performance of the Celiac Gene Screen test, 100 ethylenediaminetetraacetic acid (EDTA) blood samples, already characterized by the conventional HLA‐DQ typing method, that is, PCR sequence‐specific oligonucleotide probes (PCR‐SSOP), a concordance between both the methods were explored. For validity, a further 300 EDTA blood samples with unknown HLA‐DQ status were genotyped using the Celiac Gene Screen test, including 141 samples from CD, 56 first‐degree relatives (FDRs) of CD and 103 samples from controls. RESULTS: Of the 100 samples with known status of HLA‐DQ alleles, 79 samples were HLA‐DQ2 and/or ‐DQ8 positive, and 21 samples were HLA‐DQ2 and/or ‐DQ8 negative by conventional PCR. These 100 samples were re‐typed using the Celiac Gene screen kit; all 79 positives were typed positive, and 21 negatives were typed negative for HLA‐DQ alleles. Among 300 samples with unknown HLA‐DQ status, 118 of 141 (84%) patients with CD, 48 of 56 (86%) FDRs of CD, and 52 of 103 (50%) controls typed positive for HLA‐DQ alleles. CONCLUSIONS: The Celiac Gene Screen HLA‐DQ typing method showed excellent concordance with the conventional HLA‐DQ typing method and could be a cost‐reducing and effective method for CD‐associated HLA screening. |
format | Online Article Text |
id | pubmed-6308057 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Wiley Publishing Asia Pty Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-63080572019-01-07 Validation of a novel single‐drop rapid human leukocyte antigen‐DQ2/‐DQ8 typing method to identify subjects susceptible to celiac disease Verma, Anil K Singh, Alka Gatti, Simona Lionetti, Elena Galeazzi, Tiziana Monachesi, Chiara Franceschini, Elisa Ahuja, Vineet Catassi, Carlo Makharia, Govind K JGH Open Original Articles BACKGROUND AND AIM: Human leukocyte antigen (HLA)‐DQ2 and/or ‐DQ8 is an essential risk factor for celiac disease (CD). About 90–95% of patients with CD carry HLA‐DQ2/‐DQ8 alleles, and HLA‐DQ typing is considered an additional diagnostic test. Conventional polymerase chain reaction (PCR)‐based HLA‐DQ typing methods are expensive, complex, and a time‐consuming process. We assessed the efficacy of a novel HLA‐DQ typing method, “Celiac Gene Screen,” for the detection of CD‐associated HLA haplotypes. METHODS: To assess the diagnostic performance of the Celiac Gene Screen test, 100 ethylenediaminetetraacetic acid (EDTA) blood samples, already characterized by the conventional HLA‐DQ typing method, that is, PCR sequence‐specific oligonucleotide probes (PCR‐SSOP), a concordance between both the methods were explored. For validity, a further 300 EDTA blood samples with unknown HLA‐DQ status were genotyped using the Celiac Gene Screen test, including 141 samples from CD, 56 first‐degree relatives (FDRs) of CD and 103 samples from controls. RESULTS: Of the 100 samples with known status of HLA‐DQ alleles, 79 samples were HLA‐DQ2 and/or ‐DQ8 positive, and 21 samples were HLA‐DQ2 and/or ‐DQ8 negative by conventional PCR. These 100 samples were re‐typed using the Celiac Gene screen kit; all 79 positives were typed positive, and 21 negatives were typed negative for HLA‐DQ alleles. Among 300 samples with unknown HLA‐DQ status, 118 of 141 (84%) patients with CD, 48 of 56 (86%) FDRs of CD, and 52 of 103 (50%) controls typed positive for HLA‐DQ alleles. CONCLUSIONS: The Celiac Gene Screen HLA‐DQ typing method showed excellent concordance with the conventional HLA‐DQ typing method and could be a cost‐reducing and effective method for CD‐associated HLA screening. Wiley Publishing Asia Pty Ltd 2018-11-01 /pmc/articles/PMC6308057/ /pubmed/30619943 http://dx.doi.org/10.1002/jgh3.12090 Text en © 2018 The Authors. JGH Open: An open access journal of gastroenterology and hepatology published by Journal of Gastroenterology and Hepatology Foundation and John Wiley & Sons Australia, Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Original Articles Verma, Anil K Singh, Alka Gatti, Simona Lionetti, Elena Galeazzi, Tiziana Monachesi, Chiara Franceschini, Elisa Ahuja, Vineet Catassi, Carlo Makharia, Govind K Validation of a novel single‐drop rapid human leukocyte antigen‐DQ2/‐DQ8 typing method to identify subjects susceptible to celiac disease |
title | Validation of a novel single‐drop rapid human leukocyte antigen‐DQ2/‐DQ8 typing method to identify subjects susceptible to celiac disease |
title_full | Validation of a novel single‐drop rapid human leukocyte antigen‐DQ2/‐DQ8 typing method to identify subjects susceptible to celiac disease |
title_fullStr | Validation of a novel single‐drop rapid human leukocyte antigen‐DQ2/‐DQ8 typing method to identify subjects susceptible to celiac disease |
title_full_unstemmed | Validation of a novel single‐drop rapid human leukocyte antigen‐DQ2/‐DQ8 typing method to identify subjects susceptible to celiac disease |
title_short | Validation of a novel single‐drop rapid human leukocyte antigen‐DQ2/‐DQ8 typing method to identify subjects susceptible to celiac disease |
title_sort | validation of a novel single‐drop rapid human leukocyte antigen‐dq2/‐dq8 typing method to identify subjects susceptible to celiac disease |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6308057/ https://www.ncbi.nlm.nih.gov/pubmed/30619943 http://dx.doi.org/10.1002/jgh3.12090 |
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