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Mechanistic Studies of Fatty Acid Activation by CYP152 Peroxygenases Reveal Unexpected Desaturase Activity
[Image: see text] The majority of cytochrome P450 enzymes (CYPs) predominantly operate as monooxygenases, but recently a class of P450 enzymes was discovered, that can act as peroxygenases (CYP152). These enzymes convert fatty acids through oxidative decarboxylation, yielding terminal alkenes, and t...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323616/ https://www.ncbi.nlm.nih.gov/pubmed/30637174 http://dx.doi.org/10.1021/acscatal.8b03733 |
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author | Pickl, Mathias Kurakin, Sara Cantú Reinhard, Fabián G. Schmid, Philipp Pöcheim, Alexander Winkler, Christoph K. Kroutil, Wolfgang de Visser, Sam P. Faber, Kurt |
author_facet | Pickl, Mathias Kurakin, Sara Cantú Reinhard, Fabián G. Schmid, Philipp Pöcheim, Alexander Winkler, Christoph K. Kroutil, Wolfgang de Visser, Sam P. Faber, Kurt |
author_sort | Pickl, Mathias |
collection | PubMed |
description | [Image: see text] The majority of cytochrome P450 enzymes (CYPs) predominantly operate as monooxygenases, but recently a class of P450 enzymes was discovered, that can act as peroxygenases (CYP152). These enzymes convert fatty acids through oxidative decarboxylation, yielding terminal alkenes, and through α- and β-hydroxylation to yield hydroxy-fatty acids. Bioderived olefins may serve as biofuels, and hence understanding the mechanism and substrate scope of this class of enzymes is important. In this work, we report on the substrate scope and catalytic promiscuity of CYP OleT(JE) and two of its orthologues from the CYP152 family, utilizing α-monosubstituted branched carboxylic acids. We identify α,β-desaturation as an unexpected dominant pathway for CYP OleT(JE) with 2-methylbutyric acid. To rationalize product distributions arising from α/β-hydroxylation, oxidative decarboxylation, and desaturation depending on the substrate’s structure and binding pattern, a computational study was performed based on an active site complex of CYP OleT(JE) containing the heme cofactor in the substrate binding pocket and 2-methylbutyric acid as substrate. It is shown that substrate positioning determines the accessibility of the oxidizing species (Compound I) to the substrate and hence the regio- and chemoselectivity of the reaction. Furthermore, the results show that, for 2-methylbutyric acid, α,β-desaturation is favorable because of a rate-determining α-hydrogen atom abstraction, which cannot proceed to decarboxylation. Moreover, substrate hydroxylation is energetically impeded due to the tight shape and size of the substrate binding pocket. |
format | Online Article Text |
id | pubmed-6323616 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-63236162019-01-09 Mechanistic Studies of Fatty Acid Activation by CYP152 Peroxygenases Reveal Unexpected Desaturase Activity Pickl, Mathias Kurakin, Sara Cantú Reinhard, Fabián G. Schmid, Philipp Pöcheim, Alexander Winkler, Christoph K. Kroutil, Wolfgang de Visser, Sam P. Faber, Kurt ACS Catal [Image: see text] The majority of cytochrome P450 enzymes (CYPs) predominantly operate as monooxygenases, but recently a class of P450 enzymes was discovered, that can act as peroxygenases (CYP152). These enzymes convert fatty acids through oxidative decarboxylation, yielding terminal alkenes, and through α- and β-hydroxylation to yield hydroxy-fatty acids. Bioderived olefins may serve as biofuels, and hence understanding the mechanism and substrate scope of this class of enzymes is important. In this work, we report on the substrate scope and catalytic promiscuity of CYP OleT(JE) and two of its orthologues from the CYP152 family, utilizing α-monosubstituted branched carboxylic acids. We identify α,β-desaturation as an unexpected dominant pathway for CYP OleT(JE) with 2-methylbutyric acid. To rationalize product distributions arising from α/β-hydroxylation, oxidative decarboxylation, and desaturation depending on the substrate’s structure and binding pattern, a computational study was performed based on an active site complex of CYP OleT(JE) containing the heme cofactor in the substrate binding pocket and 2-methylbutyric acid as substrate. It is shown that substrate positioning determines the accessibility of the oxidizing species (Compound I) to the substrate and hence the regio- and chemoselectivity of the reaction. Furthermore, the results show that, for 2-methylbutyric acid, α,β-desaturation is favorable because of a rate-determining α-hydrogen atom abstraction, which cannot proceed to decarboxylation. Moreover, substrate hydroxylation is energetically impeded due to the tight shape and size of the substrate binding pocket. American Chemical Society 2018-12-06 2019-01-04 /pmc/articles/PMC6323616/ /pubmed/30637174 http://dx.doi.org/10.1021/acscatal.8b03733 Text en Copyright © 2018 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited. |
spellingShingle | Pickl, Mathias Kurakin, Sara Cantú Reinhard, Fabián G. Schmid, Philipp Pöcheim, Alexander Winkler, Christoph K. Kroutil, Wolfgang de Visser, Sam P. Faber, Kurt Mechanistic Studies of Fatty Acid Activation by CYP152 Peroxygenases Reveal Unexpected Desaturase Activity |
title | Mechanistic Studies of Fatty Acid Activation by CYP152
Peroxygenases Reveal Unexpected Desaturase Activity |
title_full | Mechanistic Studies of Fatty Acid Activation by CYP152
Peroxygenases Reveal Unexpected Desaturase Activity |
title_fullStr | Mechanistic Studies of Fatty Acid Activation by CYP152
Peroxygenases Reveal Unexpected Desaturase Activity |
title_full_unstemmed | Mechanistic Studies of Fatty Acid Activation by CYP152
Peroxygenases Reveal Unexpected Desaturase Activity |
title_short | Mechanistic Studies of Fatty Acid Activation by CYP152
Peroxygenases Reveal Unexpected Desaturase Activity |
title_sort | mechanistic studies of fatty acid activation by cyp152
peroxygenases reveal unexpected desaturase activity |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323616/ https://www.ncbi.nlm.nih.gov/pubmed/30637174 http://dx.doi.org/10.1021/acscatal.8b03733 |
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