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TranscriptClean: variant-aware correction of indels, mismatches and splice junctions in long-read transcripts

MOTIVATION: Long-read, single-molecule sequencing platforms hold great potential for isoform discovery and characterization of multi-exon transcripts. However, their high error rates are an obstacle to distinguishing novel transcript isoforms from sequencing artifacts. Therefore, we developed the pa...

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Detalles Bibliográficos
Autores principales: Wyman, Dana, Mortazavi, Ali
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6329999/
https://www.ncbi.nlm.nih.gov/pubmed/29912287
http://dx.doi.org/10.1093/bioinformatics/bty483