Optimising orbit counting of arbitrary order by equation selection

BACKGROUND: Graphlets are useful for bioinformatics network analysis. Based on the structure of Hočevar and Demšar’s ORCA algorithm, we have created an orbit counting algorithm, named Jesse. This algorithm, like ORCA, uses equations to count the orbits, but unlike ORCA it can count graphlets of any...

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Detalles Bibliográficos
Autores principales: Melckenbeeck, Ine, Audenaert, Pieter, Van Parys, Thomas, Van De Peer, Yves, Colle, Didier, Pickavet, Mario
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6334470/
https://www.ncbi.nlm.nih.gov/pubmed/30646859
http://dx.doi.org/10.1186/s12859-018-2483-9

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6334470/
https://www.ncbi.nlm.nih.gov/pubmed/30646859
http://dx.doi.org/10.1186/s12859-018-2483-9

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