Cargando…
Syntheses of defined sulfated oligohyaluronans reveal structural effects, diversity and thermodynamics of GAG–protein binding
Binding of sulfated glycosaminoglycans (GAG) to a wide spectrum of extracellular regulatory proteins is crucial for physiological processes such as cell growth, migration, tissue homeostasis and repair. Thus, GAG derivatives exhibit great relevance in the development of innovative biomaterials for t...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6346292/ https://www.ncbi.nlm.nih.gov/pubmed/30774881 http://dx.doi.org/10.1039/c8sc03649g |
_version_ | 1783389736376729600 |
---|---|
author | Köhling, Sebastian Blaszkiewicz, Joanna Ruiz-Gómez, Gloria Fernández-Bachiller, María Isabel Lemmnitzer, Katharina Panitz, Nydia Beck-Sickinger, Annette G. Schiller, Jürgen Pisabarro, M. Teresa Rademann, Jörg |
author_facet | Köhling, Sebastian Blaszkiewicz, Joanna Ruiz-Gómez, Gloria Fernández-Bachiller, María Isabel Lemmnitzer, Katharina Panitz, Nydia Beck-Sickinger, Annette G. Schiller, Jürgen Pisabarro, M. Teresa Rademann, Jörg |
author_sort | Köhling, Sebastian |
collection | PubMed |
description | Binding of sulfated glycosaminoglycans (GAG) to a wide spectrum of extracellular regulatory proteins is crucial for physiological processes such as cell growth, migration, tissue homeostasis and repair. Thus, GAG derivatives exhibit great relevance in the development of innovative biomaterials for tissue regeneration therapies. We present a synthetic strategy for the preparation of libraries of defined sulfated oligohyaluronans as model GAG systematically varied in length, sulfation pattern and anomeric substitution in order to elucidate the effects of these parameters on GAG recognition by regulatory proteins. Through an experimental and computational approach using fluorescence polarization, ITC, docking and molecular dynamics simulations we investigate the binding of these functionalized GAG derivatives to ten representative regulatory proteins including IL-8, IL-10, BMP-2, sclerostin, TIMP-3, CXCL-12, TGF-β, FGF-1, FGF-2, and AT-III, and we establish structure–activity relationships for GAG recognition. Binding is mainly driven by enthalpy with only minor entropic contributions. In several cases binding is determined by GAG length, and in all cases by the position and number of sulfates. Affinities strongly depend on the anomeric modification of the GAG. Highest binding affinities are effected by anomeric functionalization with large fluorophores and by GAG dimerization. Our experimental and theoretical results suggest that the diversity of GAG binding sites and modes is responsible for the observed high affinities and other binding features. The presented new insights into GAG–protein recognition will be of relevance to guide the design of GAG derivatives with customized functions for the engineering of new biomaterials. |
format | Online Article Text |
id | pubmed-6346292 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-63462922019-02-15 Syntheses of defined sulfated oligohyaluronans reveal structural effects, diversity and thermodynamics of GAG–protein binding Köhling, Sebastian Blaszkiewicz, Joanna Ruiz-Gómez, Gloria Fernández-Bachiller, María Isabel Lemmnitzer, Katharina Panitz, Nydia Beck-Sickinger, Annette G. Schiller, Jürgen Pisabarro, M. Teresa Rademann, Jörg Chem Sci Chemistry Binding of sulfated glycosaminoglycans (GAG) to a wide spectrum of extracellular regulatory proteins is crucial for physiological processes such as cell growth, migration, tissue homeostasis and repair. Thus, GAG derivatives exhibit great relevance in the development of innovative biomaterials for tissue regeneration therapies. We present a synthetic strategy for the preparation of libraries of defined sulfated oligohyaluronans as model GAG systematically varied in length, sulfation pattern and anomeric substitution in order to elucidate the effects of these parameters on GAG recognition by regulatory proteins. Through an experimental and computational approach using fluorescence polarization, ITC, docking and molecular dynamics simulations we investigate the binding of these functionalized GAG derivatives to ten representative regulatory proteins including IL-8, IL-10, BMP-2, sclerostin, TIMP-3, CXCL-12, TGF-β, FGF-1, FGF-2, and AT-III, and we establish structure–activity relationships for GAG recognition. Binding is mainly driven by enthalpy with only minor entropic contributions. In several cases binding is determined by GAG length, and in all cases by the position and number of sulfates. Affinities strongly depend on the anomeric modification of the GAG. Highest binding affinities are effected by anomeric functionalization with large fluorophores and by GAG dimerization. Our experimental and theoretical results suggest that the diversity of GAG binding sites and modes is responsible for the observed high affinities and other binding features. The presented new insights into GAG–protein recognition will be of relevance to guide the design of GAG derivatives with customized functions for the engineering of new biomaterials. Royal Society of Chemistry 2018-11-01 /pmc/articles/PMC6346292/ /pubmed/30774881 http://dx.doi.org/10.1039/c8sc03649g Text en This journal is © The Royal Society of Chemistry 2019 http://creativecommons.org/licenses/by-nc/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported Licence (CC BY-NC 3.0) |
spellingShingle | Chemistry Köhling, Sebastian Blaszkiewicz, Joanna Ruiz-Gómez, Gloria Fernández-Bachiller, María Isabel Lemmnitzer, Katharina Panitz, Nydia Beck-Sickinger, Annette G. Schiller, Jürgen Pisabarro, M. Teresa Rademann, Jörg Syntheses of defined sulfated oligohyaluronans reveal structural effects, diversity and thermodynamics of GAG–protein binding |
title | Syntheses of defined sulfated oligohyaluronans reveal structural effects, diversity and thermodynamics of GAG–protein binding
|
title_full | Syntheses of defined sulfated oligohyaluronans reveal structural effects, diversity and thermodynamics of GAG–protein binding
|
title_fullStr | Syntheses of defined sulfated oligohyaluronans reveal structural effects, diversity and thermodynamics of GAG–protein binding
|
title_full_unstemmed | Syntheses of defined sulfated oligohyaluronans reveal structural effects, diversity and thermodynamics of GAG–protein binding
|
title_short | Syntheses of defined sulfated oligohyaluronans reveal structural effects, diversity and thermodynamics of GAG–protein binding
|
title_sort | syntheses of defined sulfated oligohyaluronans reveal structural effects, diversity and thermodynamics of gag–protein binding |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6346292/ https://www.ncbi.nlm.nih.gov/pubmed/30774881 http://dx.doi.org/10.1039/c8sc03649g |
work_keys_str_mv | AT kohlingsebastian synthesesofdefinedsulfatedoligohyaluronansrevealstructuraleffectsdiversityandthermodynamicsofgagproteinbinding AT blaszkiewiczjoanna synthesesofdefinedsulfatedoligohyaluronansrevealstructuraleffectsdiversityandthermodynamicsofgagproteinbinding AT ruizgomezgloria synthesesofdefinedsulfatedoligohyaluronansrevealstructuraleffectsdiversityandthermodynamicsofgagproteinbinding AT fernandezbachillermariaisabel synthesesofdefinedsulfatedoligohyaluronansrevealstructuraleffectsdiversityandthermodynamicsofgagproteinbinding AT lemmnitzerkatharina synthesesofdefinedsulfatedoligohyaluronansrevealstructuraleffectsdiversityandthermodynamicsofgagproteinbinding AT panitznydia synthesesofdefinedsulfatedoligohyaluronansrevealstructuraleffectsdiversityandthermodynamicsofgagproteinbinding AT becksickingerannetteg synthesesofdefinedsulfatedoligohyaluronansrevealstructuraleffectsdiversityandthermodynamicsofgagproteinbinding AT schillerjurgen synthesesofdefinedsulfatedoligohyaluronansrevealstructuraleffectsdiversityandthermodynamicsofgagproteinbinding AT pisabarromteresa synthesesofdefinedsulfatedoligohyaluronansrevealstructuraleffectsdiversityandthermodynamicsofgagproteinbinding AT rademannjorg synthesesofdefinedsulfatedoligohyaluronansrevealstructuraleffectsdiversityandthermodynamicsofgagproteinbinding |