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Growth-dependent recombinant product formation kinetics can be reproduced through engineering of glucose transport and is prone to phenotypic heterogeneity

BACKGROUND: Escherichia coli W3110 and a group of six isogenic derivatives, each displaying distinct specific rates of glucose consumption were characterized to determine levels of GFP production and population heterogeneity. These strains have single or combinatory deletions in genes encoding phosp...

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Autores principales: Fragoso-Jiménez, Juan Carlos, Baert, Jonathan, Nguyen, Thai Minh, Liu, Wenzheng, Sassi, Hosni, Goormaghtigh, Frédéric, Van Melderen, Laurence, Gaytán, Paul, Hernández-Chávez, Georgina, Martinez, Alfredo, Delvigne, Frank, Gosset, Guillermo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6359759/
https://www.ncbi.nlm.nih.gov/pubmed/30710996
http://dx.doi.org/10.1186/s12934-019-1073-5
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author Fragoso-Jiménez, Juan Carlos
Baert, Jonathan
Nguyen, Thai Minh
Liu, Wenzheng
Sassi, Hosni
Goormaghtigh, Frédéric
Van Melderen, Laurence
Gaytán, Paul
Hernández-Chávez, Georgina
Martinez, Alfredo
Delvigne, Frank
Gosset, Guillermo
author_facet Fragoso-Jiménez, Juan Carlos
Baert, Jonathan
Nguyen, Thai Minh
Liu, Wenzheng
Sassi, Hosni
Goormaghtigh, Frédéric
Van Melderen, Laurence
Gaytán, Paul
Hernández-Chávez, Georgina
Martinez, Alfredo
Delvigne, Frank
Gosset, Guillermo
author_sort Fragoso-Jiménez, Juan Carlos
collection PubMed
description BACKGROUND: Escherichia coli W3110 and a group of six isogenic derivatives, each displaying distinct specific rates of glucose consumption were characterized to determine levels of GFP production and population heterogeneity. These strains have single or combinatory deletions in genes encoding phosphoenolpyruvate:sugar phosphotransferase system (PTS) permeases as PtsG and ManX, as well as common components EI, Hpr protein and EIIA, also the non-PTS Mgl galactose/glucose ABC transporter. They have been transformed for expressing GFP based on a lac-based expression vector, which is subject to bistability. RESULTS: These strains displayed specific glucose consumption and growth rates ranging from 1.75 to 0.45 g/g h and 0.54 to 0.16 h(−1), respectively. The rate of acetate production was strongly reduced in all mutant strains when compared with W3110/pV21. In bioreactor cultures, wild type W3110/pV21 produced 50.51 mg/L GFP, whereas strains WG/pV21 with inactive PTS IICBGlc and WGM/pV21 with the additional inactivation of PTS IIABMan showed the highest titers of GFP, corresponding to 342 and 438 mg/L, respectively. Moreover, we showed experimentally that bistable expression systems, as lac-based ones, induce strong phenotypic segregation among microbial populations. CONCLUSIONS: We have demonstrated that reduction on glucose consumption rate in E. coli leads to an improvement of GFP production. Furthermore, from the perspective of phenotypic heterogeneity, we observed in this case that heterogeneous systems are also the ones leading to the highest performance. This observation suggests reconsidering the generally accepted proposition stating that phenotypic heterogeneity is generally unwanted in bioprocess applications. [Image: see text] ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12934-019-1073-5) contains supplementary material, which is available to authorized users.
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spelling pubmed-63597592019-02-07 Growth-dependent recombinant product formation kinetics can be reproduced through engineering of glucose transport and is prone to phenotypic heterogeneity Fragoso-Jiménez, Juan Carlos Baert, Jonathan Nguyen, Thai Minh Liu, Wenzheng Sassi, Hosni Goormaghtigh, Frédéric Van Melderen, Laurence Gaytán, Paul Hernández-Chávez, Georgina Martinez, Alfredo Delvigne, Frank Gosset, Guillermo Microb Cell Fact Research BACKGROUND: Escherichia coli W3110 and a group of six isogenic derivatives, each displaying distinct specific rates of glucose consumption were characterized to determine levels of GFP production and population heterogeneity. These strains have single or combinatory deletions in genes encoding phosphoenolpyruvate:sugar phosphotransferase system (PTS) permeases as PtsG and ManX, as well as common components EI, Hpr protein and EIIA, also the non-PTS Mgl galactose/glucose ABC transporter. They have been transformed for expressing GFP based on a lac-based expression vector, which is subject to bistability. RESULTS: These strains displayed specific glucose consumption and growth rates ranging from 1.75 to 0.45 g/g h and 0.54 to 0.16 h(−1), respectively. The rate of acetate production was strongly reduced in all mutant strains when compared with W3110/pV21. In bioreactor cultures, wild type W3110/pV21 produced 50.51 mg/L GFP, whereas strains WG/pV21 with inactive PTS IICBGlc and WGM/pV21 with the additional inactivation of PTS IIABMan showed the highest titers of GFP, corresponding to 342 and 438 mg/L, respectively. Moreover, we showed experimentally that bistable expression systems, as lac-based ones, induce strong phenotypic segregation among microbial populations. CONCLUSIONS: We have demonstrated that reduction on glucose consumption rate in E. coli leads to an improvement of GFP production. Furthermore, from the perspective of phenotypic heterogeneity, we observed in this case that heterogeneous systems are also the ones leading to the highest performance. This observation suggests reconsidering the generally accepted proposition stating that phenotypic heterogeneity is generally unwanted in bioprocess applications. [Image: see text] ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12934-019-1073-5) contains supplementary material, which is available to authorized users. BioMed Central 2019-02-02 /pmc/articles/PMC6359759/ /pubmed/30710996 http://dx.doi.org/10.1186/s12934-019-1073-5 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Fragoso-Jiménez, Juan Carlos
Baert, Jonathan
Nguyen, Thai Minh
Liu, Wenzheng
Sassi, Hosni
Goormaghtigh, Frédéric
Van Melderen, Laurence
Gaytán, Paul
Hernández-Chávez, Georgina
Martinez, Alfredo
Delvigne, Frank
Gosset, Guillermo
Growth-dependent recombinant product formation kinetics can be reproduced through engineering of glucose transport and is prone to phenotypic heterogeneity
title Growth-dependent recombinant product formation kinetics can be reproduced through engineering of glucose transport and is prone to phenotypic heterogeneity
title_full Growth-dependent recombinant product formation kinetics can be reproduced through engineering of glucose transport and is prone to phenotypic heterogeneity
title_fullStr Growth-dependent recombinant product formation kinetics can be reproduced through engineering of glucose transport and is prone to phenotypic heterogeneity
title_full_unstemmed Growth-dependent recombinant product formation kinetics can be reproduced through engineering of glucose transport and is prone to phenotypic heterogeneity
title_short Growth-dependent recombinant product formation kinetics can be reproduced through engineering of glucose transport and is prone to phenotypic heterogeneity
title_sort growth-dependent recombinant product formation kinetics can be reproduced through engineering of glucose transport and is prone to phenotypic heterogeneity
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6359759/
https://www.ncbi.nlm.nih.gov/pubmed/30710996
http://dx.doi.org/10.1186/s12934-019-1073-5
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