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elPrep 4: A multithreaded framework for sequence analysis

We present elPrep 4, a reimplementation from scratch of the elPrep framework for processing sequence alignment map files in the Go programming language. elPrep 4 includes multiple new features allowing us to process all of the preparation steps defined by the GATK Best Practice pipelines for variant...

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Detalles Bibliográficos
Autores principales: Herzeel, Charlotte, Costanza, Pascal, Decap, Dries, Fostier, Jan, Verachtert, Wilfried
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6373927/
https://www.ncbi.nlm.nih.gov/pubmed/30759172
http://dx.doi.org/10.1371/journal.pone.0209523