16S rRNA sequence embeddings: Meaningful numeric feature representations of nucleotide sequences that are convenient for downstream analyses

Advances in high-throughput sequencing have increased the availability of microbiome sequencing data that can be exploited to characterize microbiome community structure in situ. We explore using word and sentence embedding approaches for nucleotide sequences since they may be a suitable numerical r...

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Detalles Bibliográficos
Autores principales: Woloszynek, Stephen, Zhao, Zhengqiao, Chen, Jian, Rosen, Gail L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6407789/
https://www.ncbi.nlm.nih.gov/pubmed/30807567
http://dx.doi.org/10.1371/journal.pcbi.1006721

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6407789/
https://www.ncbi.nlm.nih.gov/pubmed/30807567
http://dx.doi.org/10.1371/journal.pcbi.1006721

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