Cargando…

Additional value of a combined genetic risk score to standard cardiovascular stratification

The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 co...

Descripción completa

Detalles Bibliográficos
Autores principales: Pereira, Andreia, Mendonca, Maria Isabel, Borges, Sofia, Sousa, Ana Célia, Freitas, Sónia, Henriques, Eva, Rodrigues, Mariana, Freitas, Ana Isabel, Guerra, Graça, Freitas, Carolina, Pereira, Décio, Brehm, António, Reis, Roberto Palma Dos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Sociedade Brasileira de Genética 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6415604/
https://www.ncbi.nlm.nih.gov/pubmed/30571812
http://dx.doi.org/10.1590/1678-4685-GMB-2017-0173
_version_ 1783403219133661184
author Pereira, Andreia
Mendonca, Maria Isabel
Borges, Sofia
Sousa, Ana Célia
Freitas, Sónia
Henriques, Eva
Rodrigues, Mariana
Freitas, Ana Isabel
Guerra, Graça
Freitas, Carolina
Pereira, Décio
Brehm, António
Reis, Roberto Palma Dos
author_facet Pereira, Andreia
Mendonca, Maria Isabel
Borges, Sofia
Sousa, Ana Célia
Freitas, Sónia
Henriques, Eva
Rodrigues, Mariana
Freitas, Ana Isabel
Guerra, Graça
Freitas, Carolina
Pereira, Décio
Brehm, António
Reis, Roberto Palma Dos
author_sort Pereira, Andreia
collection PubMed
description The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk.
format Online
Article
Text
id pubmed-6415604
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Sociedade Brasileira de Genética
record_format MEDLINE/PubMed
spelling pubmed-64156042019-03-21 Additional value of a combined genetic risk score to standard cardiovascular stratification Pereira, Andreia Mendonca, Maria Isabel Borges, Sofia Sousa, Ana Célia Freitas, Sónia Henriques, Eva Rodrigues, Mariana Freitas, Ana Isabel Guerra, Graça Freitas, Carolina Pereira, Décio Brehm, António Reis, Roberto Palma Dos Genet Mol Biol Human and Medical Genetics The utility of genetic risk scores (GRS) as independent risk predictors remains inconclusive. Here, we evaluate the additive value of a multi-locus GRS to the Framingham risk score (FRS) in coronary artery disease (CAD) risk prediction. A total of 2888 individuals (1566 coronary patients and 1322 controls) were divided into three subgroups according to FRS. Multiplicative GRS was determined for 32 genetic variants associated to CAD. Logistic Regression and Area Under the Curve (AUC) were determined first, using the TRF for each FRS subgroup, and secondly, adding GRS. Different models (TRF, TRF+GRS) were used to classify the subjects into risk categories for the FRS 10-year predicted risk. The improvement offered by GRS was expressed as Net Reclassification Index and Integrated Discrimination Improvement. Multivariate analysis showed that GRS was an independent predictor for CAD (OR = 1.87; p<0.0001). Diabetes, arterial hypertension, dyslipidemia and smoking status were also independent CAD predictors (p<0.05). GRS added predictive value to TRF across all risk subgroups. NRI showed a significant improvement in all categories. In conclusion, GRS provided a better incremental value in intermediate subgroup. In this subgroup, inclusion of genotyping may be considered to better stratify cardiovascular risk. Sociedade Brasileira de Genética 2018 /pmc/articles/PMC6415604/ /pubmed/30571812 http://dx.doi.org/10.1590/1678-4685-GMB-2017-0173 Text en Copyright © 2018, Sociedade Brasileira de Genética. https://creativecommons.org/licenses/by/4.0/ License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited.
spellingShingle Human and Medical Genetics
Pereira, Andreia
Mendonca, Maria Isabel
Borges, Sofia
Sousa, Ana Célia
Freitas, Sónia
Henriques, Eva
Rodrigues, Mariana
Freitas, Ana Isabel
Guerra, Graça
Freitas, Carolina
Pereira, Décio
Brehm, António
Reis, Roberto Palma Dos
Additional value of a combined genetic risk score to standard cardiovascular stratification
title Additional value of a combined genetic risk score to standard cardiovascular stratification
title_full Additional value of a combined genetic risk score to standard cardiovascular stratification
title_fullStr Additional value of a combined genetic risk score to standard cardiovascular stratification
title_full_unstemmed Additional value of a combined genetic risk score to standard cardiovascular stratification
title_short Additional value of a combined genetic risk score to standard cardiovascular stratification
title_sort additional value of a combined genetic risk score to standard cardiovascular stratification
topic Human and Medical Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6415604/
https://www.ncbi.nlm.nih.gov/pubmed/30571812
http://dx.doi.org/10.1590/1678-4685-GMB-2017-0173
work_keys_str_mv AT pereiraandreia additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT mendoncamariaisabel additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT borgessofia additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT sousaanacelia additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT freitassonia additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT henriqueseva additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT rodriguesmariana additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT freitasanaisabel additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT guerragraca additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT freitascarolina additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT pereiradecio additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT brehmantonio additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification
AT reisrobertopalmados additionalvalueofacombinedgeneticriskscoretostandardcardiovascularstratification