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Ammonothermal Synthesis, X‐Ray and Time‐of‐Flight Neutron Crystal‐Structure Determination, and Vibrational Properties of Barium Guanidinate, Ba(CN(3)H(4))(2)
We report the crystal structure of Ba(CN(3)H(4))(2) as synthesized from liquid ammonia. Structure solution based on X‐ray diffraction data suffers from a severe pseudo‐tetragonal problem due to extreme scattering contrast, so the true monoclinic symmetry is detectable only from neutron powder diffra...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6417364/ https://www.ncbi.nlm.nih.gov/pubmed/30915268 http://dx.doi.org/10.1002/open.201900068 |
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author | Benz, Sebastian Missong, Ronja Ogutu, George Stoffel, Ralf P. Englert, Ulli Torii, Shuki Miao, Ping Kamiyama, Takashi Dronskowski, Richard |
author_facet | Benz, Sebastian Missong, Ronja Ogutu, George Stoffel, Ralf P. Englert, Ulli Torii, Shuki Miao, Ping Kamiyama, Takashi Dronskowski, Richard |
author_sort | Benz, Sebastian |
collection | PubMed |
description | We report the crystal structure of Ba(CN(3)H(4))(2) as synthesized from liquid ammonia. Structure solution based on X‐ray diffraction data suffers from a severe pseudo‐tetragonal problem due to extreme scattering contrast, so the true monoclinic symmetry is detectable only from neutron powder diffraction patterns, and structure solution and refinement was greatly aided by density‐functional theory. The symmetry lowering is due to slight deviations of the guanidinate anion from the mirror plane in space group P [Formula: see text] b2, a necessity of hydrogen bonding. At 300 K, barium guanidinate crystallizes in P2(1)/c with a=6.26439(2) Å, b=16.58527(5) Å, c=6.25960(2) Å, and a monoclinic angle of β=90.000(1)°. To improve the data‐to‐parameter ratio, anisotropic displacement parameters from first‐principles theory were incorporated in the neutron refinement. Given the correct structural model, the positional parameters of the heavy atoms were also refinable from X‐ray diffraction of a twinned crystal. The two independent guanidinate anions adopt the all‐trans‐ and the anti‐shape. The Ba cation is coordinated by eight imino nitrogens in a square antiprism with Ba−N contacts between 2.81 and 3.04 Å. The IR and Raman spectra of barium guanidinate were compared with DFT‐calculated phonon spectra to identify the vibrational modes. |
format | Online Article Text |
id | pubmed-6417364 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-64173642019-03-26 Ammonothermal Synthesis, X‐Ray and Time‐of‐Flight Neutron Crystal‐Structure Determination, and Vibrational Properties of Barium Guanidinate, Ba(CN(3)H(4))(2) Benz, Sebastian Missong, Ronja Ogutu, George Stoffel, Ralf P. Englert, Ulli Torii, Shuki Miao, Ping Kamiyama, Takashi Dronskowski, Richard ChemistryOpen Full Papers We report the crystal structure of Ba(CN(3)H(4))(2) as synthesized from liquid ammonia. Structure solution based on X‐ray diffraction data suffers from a severe pseudo‐tetragonal problem due to extreme scattering contrast, so the true monoclinic symmetry is detectable only from neutron powder diffraction patterns, and structure solution and refinement was greatly aided by density‐functional theory. The symmetry lowering is due to slight deviations of the guanidinate anion from the mirror plane in space group P [Formula: see text] b2, a necessity of hydrogen bonding. At 300 K, barium guanidinate crystallizes in P2(1)/c with a=6.26439(2) Å, b=16.58527(5) Å, c=6.25960(2) Å, and a monoclinic angle of β=90.000(1)°. To improve the data‐to‐parameter ratio, anisotropic displacement parameters from first‐principles theory were incorporated in the neutron refinement. Given the correct structural model, the positional parameters of the heavy atoms were also refinable from X‐ray diffraction of a twinned crystal. The two independent guanidinate anions adopt the all‐trans‐ and the anti‐shape. The Ba cation is coordinated by eight imino nitrogens in a square antiprism with Ba−N contacts between 2.81 and 3.04 Å. The IR and Raman spectra of barium guanidinate were compared with DFT‐calculated phonon spectra to identify the vibrational modes. John Wiley and Sons Inc. 2019-03-14 /pmc/articles/PMC6417364/ /pubmed/30915268 http://dx.doi.org/10.1002/open.201900068 Text en © 2019 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Full Papers Benz, Sebastian Missong, Ronja Ogutu, George Stoffel, Ralf P. Englert, Ulli Torii, Shuki Miao, Ping Kamiyama, Takashi Dronskowski, Richard Ammonothermal Synthesis, X‐Ray and Time‐of‐Flight Neutron Crystal‐Structure Determination, and Vibrational Properties of Barium Guanidinate, Ba(CN(3)H(4))(2) |
title | Ammonothermal Synthesis, X‐Ray and Time‐of‐Flight Neutron Crystal‐Structure Determination, and Vibrational Properties of Barium Guanidinate, Ba(CN(3)H(4))(2)
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title_full | Ammonothermal Synthesis, X‐Ray and Time‐of‐Flight Neutron Crystal‐Structure Determination, and Vibrational Properties of Barium Guanidinate, Ba(CN(3)H(4))(2)
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title_fullStr | Ammonothermal Synthesis, X‐Ray and Time‐of‐Flight Neutron Crystal‐Structure Determination, and Vibrational Properties of Barium Guanidinate, Ba(CN(3)H(4))(2)
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title_full_unstemmed | Ammonothermal Synthesis, X‐Ray and Time‐of‐Flight Neutron Crystal‐Structure Determination, and Vibrational Properties of Barium Guanidinate, Ba(CN(3)H(4))(2)
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title_short | Ammonothermal Synthesis, X‐Ray and Time‐of‐Flight Neutron Crystal‐Structure Determination, and Vibrational Properties of Barium Guanidinate, Ba(CN(3)H(4))(2)
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title_sort | ammonothermal synthesis, x‐ray and time‐of‐flight neutron crystal‐structure determination, and vibrational properties of barium guanidinate, ba(cn(3)h(4))(2) |
topic | Full Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6417364/ https://www.ncbi.nlm.nih.gov/pubmed/30915268 http://dx.doi.org/10.1002/open.201900068 |
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