Sunbeam: an extensible pipeline for analyzing metagenomic sequencing experiments

BACKGROUND: Analysis of mixed microbial communities using metagenomic sequencing experiments requires multiple preprocessing and analytical steps to interpret the microbial and genetic composition of samples. Analytical steps include quality control, adapter trimming, host decontamination, metagenom...

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Detalles Bibliográficos
Autores principales: Clarke, Erik L., Taylor, Louis J., Zhao, Chunyu, Connell, Andrew, Lee, Jung-Jin, Fett, Bryton, Bushman, Frederic D., Bittinger, Kyle
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6429786/
https://www.ncbi.nlm.nih.gov/pubmed/30902113
http://dx.doi.org/10.1186/s40168-019-0658-x

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6429786/
https://www.ncbi.nlm.nih.gov/pubmed/30902113
http://dx.doi.org/10.1186/s40168-019-0658-x

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