MGS-Fast: Metagenomic shotgun data fast annotation using microbial gene catalogs

BACKGROUND: Current methods used for annotating metagenomics shotgun sequencing (MGS) data rely on a computationally intensive and low-stringency approach of mapping each read to a generic database of proteins or reference microbial genomes. RESULTS: We developed MGS-Fast, an analysis approach for s...

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Detalles Bibliográficos
Autores principales: Brown, Stuart M, Chen, Hao, Hao, Yuhan, Laungani, Bobby P, Ali, Thahmina A, Dong, Changsu, Lijeron, Carlos, Kim, Baekdoo, Wultsch, Claudia, Pei, Zhiheng, Krampis, Konstantinos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6446249/
https://www.ncbi.nlm.nih.gov/pubmed/30942867
http://dx.doi.org/10.1093/gigascience/giz020

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6446249/
https://www.ncbi.nlm.nih.gov/pubmed/30942867
http://dx.doi.org/10.1093/gigascience/giz020

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