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Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort

PURPOSE: Elevated intraocular pressure (IOP) is an important risk factor for glaucoma. We constructed polygenic risk scores (PRSs) for IOP using the UK Biobank (UKB) data set to test whether the PRSs are associated with IOP and whether using them improves glaucoma prediction. METHODS: We conducted t...

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Autores principales: Gao, X. Raymond, Huang, Hua, Kim, Heejin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6450641/
https://www.ncbi.nlm.nih.gov/pubmed/30972231
http://dx.doi.org/10.1167/tvst.8.2.10
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author Gao, X. Raymond
Huang, Hua
Kim, Heejin
author_facet Gao, X. Raymond
Huang, Hua
Kim, Heejin
author_sort Gao, X. Raymond
collection PubMed
description PURPOSE: Elevated intraocular pressure (IOP) is an important risk factor for glaucoma. We constructed polygenic risk scores (PRSs) for IOP using the UK Biobank (UKB) data set to test whether the PRSs are associated with IOP and whether using them improves glaucoma prediction. METHODS: We conducted this study using 435,678 European participants from the UKB. We constructed weighted and unweighted PRSs using single nucleotide polymorphisms (SNPs) derived from the UKB data and previously reported IOP SNPs. We examined the associations of the PRSs with IOP and primary open-angle glaucoma (POAG) using linear and logistic regression, respectively. To quantify the discriminatory ability of the PRSs on POAG, we used the area under the receiver operating characteristic curve (AUC). RESULTS: The weighted PRS was significantly associated with IOP (P ∼ 10(−200)), after adjusting for age and sex. The PRS explained an additional 4% of variance in IOP. The weighted PRS was also significantly associated with POAG (P = 1.8 × 10(−77)). Subjects in the top quintile of the IOP PRS were 6.34 (95% confidence interval [CI]: 4.82–8.33; P = 2.1 × 10(−57)) times more likely to have POAG, compared to those in the bottom category. The weighted PRS improved the discriminatory power for POAG (AUC increased by 5%, P = 6.2 × 10(−22)) when added to the other covariates. The unweighted PRS exhibited similar results. CONCLUSIONS: We determined that IOP PRSs are significantly associated with IOP and improve the prediction of POAG. TRANSLATIONAL RELEVANCE: PRSs help reduce the burden of glaucoma by early detection of genetically susceptible individuals.
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spelling pubmed-64506412019-04-10 Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort Gao, X. Raymond Huang, Hua Kim, Heejin Transl Vis Sci Technol Articles PURPOSE: Elevated intraocular pressure (IOP) is an important risk factor for glaucoma. We constructed polygenic risk scores (PRSs) for IOP using the UK Biobank (UKB) data set to test whether the PRSs are associated with IOP and whether using them improves glaucoma prediction. METHODS: We conducted this study using 435,678 European participants from the UKB. We constructed weighted and unweighted PRSs using single nucleotide polymorphisms (SNPs) derived from the UKB data and previously reported IOP SNPs. We examined the associations of the PRSs with IOP and primary open-angle glaucoma (POAG) using linear and logistic regression, respectively. To quantify the discriminatory ability of the PRSs on POAG, we used the area under the receiver operating characteristic curve (AUC). RESULTS: The weighted PRS was significantly associated with IOP (P ∼ 10(−200)), after adjusting for age and sex. The PRS explained an additional 4% of variance in IOP. The weighted PRS was also significantly associated with POAG (P = 1.8 × 10(−77)). Subjects in the top quintile of the IOP PRS were 6.34 (95% confidence interval [CI]: 4.82–8.33; P = 2.1 × 10(−57)) times more likely to have POAG, compared to those in the bottom category. The weighted PRS improved the discriminatory power for POAG (AUC increased by 5%, P = 6.2 × 10(−22)) when added to the other covariates. The unweighted PRS exhibited similar results. CONCLUSIONS: We determined that IOP PRSs are significantly associated with IOP and improve the prediction of POAG. TRANSLATIONAL RELEVANCE: PRSs help reduce the burden of glaucoma by early detection of genetically susceptible individuals. The Association for Research in Vision and Ophthalmology 2019-04-04 /pmc/articles/PMC6450641/ /pubmed/30972231 http://dx.doi.org/10.1167/tvst.8.2.10 Text en Copyright 2019 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
spellingShingle Articles
Gao, X. Raymond
Huang, Hua
Kim, Heejin
Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort
title Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort
title_full Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort
title_fullStr Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort
title_full_unstemmed Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort
title_short Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort
title_sort polygenic risk score is associated with intraocular pressure and improves glaucoma prediction in the uk biobank cohort
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6450641/
https://www.ncbi.nlm.nih.gov/pubmed/30972231
http://dx.doi.org/10.1167/tvst.8.2.10
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