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Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort
PURPOSE: Elevated intraocular pressure (IOP) is an important risk factor for glaucoma. We constructed polygenic risk scores (PRSs) for IOP using the UK Biobank (UKB) data set to test whether the PRSs are associated with IOP and whether using them improves glaucoma prediction. METHODS: We conducted t...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Association for Research in Vision and Ophthalmology
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6450641/ https://www.ncbi.nlm.nih.gov/pubmed/30972231 http://dx.doi.org/10.1167/tvst.8.2.10 |
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author | Gao, X. Raymond Huang, Hua Kim, Heejin |
author_facet | Gao, X. Raymond Huang, Hua Kim, Heejin |
author_sort | Gao, X. Raymond |
collection | PubMed |
description | PURPOSE: Elevated intraocular pressure (IOP) is an important risk factor for glaucoma. We constructed polygenic risk scores (PRSs) for IOP using the UK Biobank (UKB) data set to test whether the PRSs are associated with IOP and whether using them improves glaucoma prediction. METHODS: We conducted this study using 435,678 European participants from the UKB. We constructed weighted and unweighted PRSs using single nucleotide polymorphisms (SNPs) derived from the UKB data and previously reported IOP SNPs. We examined the associations of the PRSs with IOP and primary open-angle glaucoma (POAG) using linear and logistic regression, respectively. To quantify the discriminatory ability of the PRSs on POAG, we used the area under the receiver operating characteristic curve (AUC). RESULTS: The weighted PRS was significantly associated with IOP (P ∼ 10(−200)), after adjusting for age and sex. The PRS explained an additional 4% of variance in IOP. The weighted PRS was also significantly associated with POAG (P = 1.8 × 10(−77)). Subjects in the top quintile of the IOP PRS were 6.34 (95% confidence interval [CI]: 4.82–8.33; P = 2.1 × 10(−57)) times more likely to have POAG, compared to those in the bottom category. The weighted PRS improved the discriminatory power for POAG (AUC increased by 5%, P = 6.2 × 10(−22)) when added to the other covariates. The unweighted PRS exhibited similar results. CONCLUSIONS: We determined that IOP PRSs are significantly associated with IOP and improve the prediction of POAG. TRANSLATIONAL RELEVANCE: PRSs help reduce the burden of glaucoma by early detection of genetically susceptible individuals. |
format | Online Article Text |
id | pubmed-6450641 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | The Association for Research in Vision and Ophthalmology |
record_format | MEDLINE/PubMed |
spelling | pubmed-64506412019-04-10 Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort Gao, X. Raymond Huang, Hua Kim, Heejin Transl Vis Sci Technol Articles PURPOSE: Elevated intraocular pressure (IOP) is an important risk factor for glaucoma. We constructed polygenic risk scores (PRSs) for IOP using the UK Biobank (UKB) data set to test whether the PRSs are associated with IOP and whether using them improves glaucoma prediction. METHODS: We conducted this study using 435,678 European participants from the UKB. We constructed weighted and unweighted PRSs using single nucleotide polymorphisms (SNPs) derived from the UKB data and previously reported IOP SNPs. We examined the associations of the PRSs with IOP and primary open-angle glaucoma (POAG) using linear and logistic regression, respectively. To quantify the discriminatory ability of the PRSs on POAG, we used the area under the receiver operating characteristic curve (AUC). RESULTS: The weighted PRS was significantly associated with IOP (P ∼ 10(−200)), after adjusting for age and sex. The PRS explained an additional 4% of variance in IOP. The weighted PRS was also significantly associated with POAG (P = 1.8 × 10(−77)). Subjects in the top quintile of the IOP PRS were 6.34 (95% confidence interval [CI]: 4.82–8.33; P = 2.1 × 10(−57)) times more likely to have POAG, compared to those in the bottom category. The weighted PRS improved the discriminatory power for POAG (AUC increased by 5%, P = 6.2 × 10(−22)) when added to the other covariates. The unweighted PRS exhibited similar results. CONCLUSIONS: We determined that IOP PRSs are significantly associated with IOP and improve the prediction of POAG. TRANSLATIONAL RELEVANCE: PRSs help reduce the burden of glaucoma by early detection of genetically susceptible individuals. The Association for Research in Vision and Ophthalmology 2019-04-04 /pmc/articles/PMC6450641/ /pubmed/30972231 http://dx.doi.org/10.1167/tvst.8.2.10 Text en Copyright 2019 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. |
spellingShingle | Articles Gao, X. Raymond Huang, Hua Kim, Heejin Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort |
title | Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort |
title_full | Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort |
title_fullStr | Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort |
title_full_unstemmed | Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort |
title_short | Polygenic Risk Score Is Associated With Intraocular Pressure and Improves Glaucoma Prediction in the UK Biobank Cohort |
title_sort | polygenic risk score is associated with intraocular pressure and improves glaucoma prediction in the uk biobank cohort |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6450641/ https://www.ncbi.nlm.nih.gov/pubmed/30972231 http://dx.doi.org/10.1167/tvst.8.2.10 |
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