Common workflow language (CWL)-based software pipeline for de novo genome assembly from long- and short-read data

BACKGROUND: Here, we created an automated pipeline for the de novoassembly of genomes from Pacific Biosciences long-read and Illumina short-read data using common workflow language (CWL). To evaluate the performance of this pipeline, we assembled the nuclear genomes of the eukaryotes Caenorhabditis...

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Detalles Bibliográficos
Autores principales: Korhonen, Pasi K, Hall, Ross S, Young, Neil D, Gasser, Robin B
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6451199/
https://www.ncbi.nlm.nih.gov/pubmed/30821816
http://dx.doi.org/10.1093/gigascience/giz014

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6451199/
https://www.ncbi.nlm.nih.gov/pubmed/30821816
http://dx.doi.org/10.1093/gigascience/giz014

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