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Estimating the total genome length of a metagenomic sample using k-mers

BACKGROUND: Metagenomic sequencing is a powerful technology for studying the mixture of microbes or the microbiomes on human and in the environment. One basic task of analyzing metagenomic data is to identify the component genomes in the community. This task is challenging due to the complexity of m...

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Detalles Bibliográficos
Autores principales: Hua, Kui, Zhang, Xuegong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6456951/
https://www.ncbi.nlm.nih.gov/pubmed/30967110
http://dx.doi.org/10.1186/s12864-019-5467-x