Cargando…
Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460
Ammonia oxidizing bacteria (AOB) use the cytotoxic, energetic molecule hydroxylamine (NH(2)OH) as a source of reducing equivalents for cellular respiration. Despite disproportionation or violent decomposition being typical outcomes of reactions of NH(2)OH with iron, AOB and anammox heme P460 protein...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6457333/ https://www.ncbi.nlm.nih.gov/pubmed/31015919 http://dx.doi.org/10.1039/c9sc00195f |
_version_ | 1783409888274153472 |
---|---|
author | Smith, Meghan A. Majer, Sean H. Vilbert, Avery C. Lancaster, Kyle M. |
author_facet | Smith, Meghan A. Majer, Sean H. Vilbert, Avery C. Lancaster, Kyle M. |
author_sort | Smith, Meghan A. |
collection | PubMed |
description | Ammonia oxidizing bacteria (AOB) use the cytotoxic, energetic molecule hydroxylamine (NH(2)OH) as a source of reducing equivalents for cellular respiration. Despite disproportionation or violent decomposition being typical outcomes of reactions of NH(2)OH with iron, AOB and anammox heme P460 proteins including cytochrome (cyt) P460 and hydroxylamine oxidoreductase (HAO) effect controlled, stepwise oxidation of NH(2)OH to nitric oxide (NO). Curiously, a recently characterized cyt P460 variant from the AOB Nitrosomonas sp. AL212 is able to form all intermediates of cyt P460 catalysis, but is nevertheless incompetent for NH(2)OH oxidation. We now show via site-directed mutagenesis, activity assays, spectroscopy, and structural biology that this lack of activity is attributable to the absence of a critical basic glutamate residue in the distal pocket above the heme P460 cofactor. This substitution is the only distinguishing characteristic of a protein that is otherwise effectively structurally and spectroscopically identical to an active variant. This highlights and reinforces a fundamental principal of metalloenzymology: metallocofactor inner-sphere geometric and electronic structures are in many cases insufficient for imbuing reactivity; a precisely defined outer coordination sphere contributed by the polypeptide matrix can be the key differentiator between a metalloenzyme and an unreactive metalloprotein. |
format | Online Article Text |
id | pubmed-6457333 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-64573332019-04-23 Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460 Smith, Meghan A. Majer, Sean H. Vilbert, Avery C. Lancaster, Kyle M. Chem Sci Chemistry Ammonia oxidizing bacteria (AOB) use the cytotoxic, energetic molecule hydroxylamine (NH(2)OH) as a source of reducing equivalents for cellular respiration. Despite disproportionation or violent decomposition being typical outcomes of reactions of NH(2)OH with iron, AOB and anammox heme P460 proteins including cytochrome (cyt) P460 and hydroxylamine oxidoreductase (HAO) effect controlled, stepwise oxidation of NH(2)OH to nitric oxide (NO). Curiously, a recently characterized cyt P460 variant from the AOB Nitrosomonas sp. AL212 is able to form all intermediates of cyt P460 catalysis, but is nevertheless incompetent for NH(2)OH oxidation. We now show via site-directed mutagenesis, activity assays, spectroscopy, and structural biology that this lack of activity is attributable to the absence of a critical basic glutamate residue in the distal pocket above the heme P460 cofactor. This substitution is the only distinguishing characteristic of a protein that is otherwise effectively structurally and spectroscopically identical to an active variant. This highlights and reinforces a fundamental principal of metalloenzymology: metallocofactor inner-sphere geometric and electronic structures are in many cases insufficient for imbuing reactivity; a precisely defined outer coordination sphere contributed by the polypeptide matrix can be the key differentiator between a metalloenzyme and an unreactive metalloprotein. Royal Society of Chemistry 2019-03-06 /pmc/articles/PMC6457333/ /pubmed/31015919 http://dx.doi.org/10.1039/c9sc00195f Text en This journal is © The Royal Society of Chemistry 2019 http://creativecommons.org/licenses/by-nc/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported Licence (CC BY-NC 3.0) |
spellingShingle | Chemistry Smith, Meghan A. Majer, Sean H. Vilbert, Avery C. Lancaster, Kyle M. Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460 |
title | Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460
|
title_full | Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460
|
title_fullStr | Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460
|
title_full_unstemmed | Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460
|
title_short | Controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome P460
|
title_sort | controlling a burn: outer-sphere gating of hydroxylamine oxidation by a distal base in cytochrome p460 |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6457333/ https://www.ncbi.nlm.nih.gov/pubmed/31015919 http://dx.doi.org/10.1039/c9sc00195f |
work_keys_str_mv | AT smithmeghana controllingaburnouterspheregatingofhydroxylamineoxidationbyadistalbaseincytochromep460 AT majerseanh controllingaburnouterspheregatingofhydroxylamineoxidationbyadistalbaseincytochromep460 AT vilbertaveryc controllingaburnouterspheregatingofhydroxylamineoxidationbyadistalbaseincytochromep460 AT lancasterkylem controllingaburnouterspheregatingofhydroxylamineoxidationbyadistalbaseincytochromep460 |