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A general approach to risk modeling using partial surrogate markers with application to perioperative acute kidney injury
BACKGROUND: Surrogate outcomes are often utilized when disease outcomes are difficult to directly measure. When a biological threshold effect exists, surrogate outcomes may only represent disease in specific subpopulations. We refer to these outcomes as “partial surrogate outcomes.” We hypothesized...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6460789/ https://www.ncbi.nlm.nih.gov/pubmed/31093550 http://dx.doi.org/10.1186/s41512-017-0022-1 |
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author | Smith, Derek K. Smith, Loren E. Billings, Frederic T. Blume, Jeffrey D. |
author_facet | Smith, Derek K. Smith, Loren E. Billings, Frederic T. Blume, Jeffrey D. |
author_sort | Smith, Derek K. |
collection | PubMed |
description | BACKGROUND: Surrogate outcomes are often utilized when disease outcomes are difficult to directly measure. When a biological threshold effect exists, surrogate outcomes may only represent disease in specific subpopulations. We refer to these outcomes as “partial surrogate outcomes.” We hypothesized that risk models of partial surrogate outcomes would perform poorly if they fail to account for this population heterogeneity. We developed criteria for predictive model development using partial surrogate outcomes and demonstrate their importance in model selection and evaluation within the clinical example of serum creatinine, a partial surrogate outcome for acute kidney injury. METHODS: Data from 4737 patients who underwent cardiac surgery at a major academic center were obtained. Linear and mixture models were fit on maximum 2-day serum creatinine change as a surrogate for estimated glomerular filtration rate at 90 days after surgery (eGFR90), adjusted for known AKI risk factors. The AUC for eGFR90 decline and Spearman’s rho were calculated to compare model discrimination between the linear model and a single component of the mixture model deemed to represent the informative subpopulation. Simulation studies based on the clinical data were conducted to further demonstrate the consistency and limitations of the procedure. RESULTS: The mixture model was highly favored over the linear model with BICs of 2131.3 and 5034.3, respectively. When model discrimination was evaluated with respect to the partial surrogate, the linear model displays superior performance (p < 0.001); however, when it was evaluated with respect to the target outcome, the mixture model approach displays superior performance (AUC difference p = 0.002; Spearman’s difference p = 0.020). Simulation studies demonstrate that the nature of the heterogeneity determines the magnitude of any advantage the mixture model. CONCLUSIONS: Partial surrogate outcomes add complexity and limitations to risk score modeling, including the potential for the usual metrics of discrimination to be misleading. Partial surrogacy can be potentially uncovered and appropriately accounted for using a mixture model approach. Serum creatinine behaved as a partial surrogate outcome consistent with two patient subpopulations, one representing patients whose injury did not exceed their renal functional reserve and a second population representing patients whose injury did exceed renal functional reserve. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s41512-017-0022-1) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6460789 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-64607892019-05-15 A general approach to risk modeling using partial surrogate markers with application to perioperative acute kidney injury Smith, Derek K. Smith, Loren E. Billings, Frederic T. Blume, Jeffrey D. Diagn Progn Res Research BACKGROUND: Surrogate outcomes are often utilized when disease outcomes are difficult to directly measure. When a biological threshold effect exists, surrogate outcomes may only represent disease in specific subpopulations. We refer to these outcomes as “partial surrogate outcomes.” We hypothesized that risk models of partial surrogate outcomes would perform poorly if they fail to account for this population heterogeneity. We developed criteria for predictive model development using partial surrogate outcomes and demonstrate their importance in model selection and evaluation within the clinical example of serum creatinine, a partial surrogate outcome for acute kidney injury. METHODS: Data from 4737 patients who underwent cardiac surgery at a major academic center were obtained. Linear and mixture models were fit on maximum 2-day serum creatinine change as a surrogate for estimated glomerular filtration rate at 90 days after surgery (eGFR90), adjusted for known AKI risk factors. The AUC for eGFR90 decline and Spearman’s rho were calculated to compare model discrimination between the linear model and a single component of the mixture model deemed to represent the informative subpopulation. Simulation studies based on the clinical data were conducted to further demonstrate the consistency and limitations of the procedure. RESULTS: The mixture model was highly favored over the linear model with BICs of 2131.3 and 5034.3, respectively. When model discrimination was evaluated with respect to the partial surrogate, the linear model displays superior performance (p < 0.001); however, when it was evaluated with respect to the target outcome, the mixture model approach displays superior performance (AUC difference p = 0.002; Spearman’s difference p = 0.020). Simulation studies demonstrate that the nature of the heterogeneity determines the magnitude of any advantage the mixture model. CONCLUSIONS: Partial surrogate outcomes add complexity and limitations to risk score modeling, including the potential for the usual metrics of discrimination to be misleading. Partial surrogacy can be potentially uncovered and appropriately accounted for using a mixture model approach. Serum creatinine behaved as a partial surrogate outcome consistent with two patient subpopulations, one representing patients whose injury did not exceed their renal functional reserve and a second population representing patients whose injury did exceed renal functional reserve. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s41512-017-0022-1) contains supplementary material, which is available to authorized users. BioMed Central 2017-12-28 /pmc/articles/PMC6460789/ /pubmed/31093550 http://dx.doi.org/10.1186/s41512-017-0022-1 Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Smith, Derek K. Smith, Loren E. Billings, Frederic T. Blume, Jeffrey D. A general approach to risk modeling using partial surrogate markers with application to perioperative acute kidney injury |
title | A general approach to risk modeling using partial surrogate markers with application to perioperative acute kidney injury |
title_full | A general approach to risk modeling using partial surrogate markers with application to perioperative acute kidney injury |
title_fullStr | A general approach to risk modeling using partial surrogate markers with application to perioperative acute kidney injury |
title_full_unstemmed | A general approach to risk modeling using partial surrogate markers with application to perioperative acute kidney injury |
title_short | A general approach to risk modeling using partial surrogate markers with application to perioperative acute kidney injury |
title_sort | general approach to risk modeling using partial surrogate markers with application to perioperative acute kidney injury |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6460789/ https://www.ncbi.nlm.nih.gov/pubmed/31093550 http://dx.doi.org/10.1186/s41512-017-0022-1 |
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