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Extensive deep neural networks for transferring small scale learning to large scale systems
We present a physically-motivated topology of a deep neural network that can efficiently infer extensive parameters (such as energy, entropy, or number of particles) of arbitrarily large systems, doing so with [Image: see text] scaling. We use a form of domain decomposition for training and inferenc...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6460955/ https://www.ncbi.nlm.nih.gov/pubmed/31015950 http://dx.doi.org/10.1039/c8sc04578j |
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author | Mills, Kyle Ryczko, Kevin Luchak, Iryna Domurad, Adam Beeler, Chris Tamblyn, Isaac |
author_facet | Mills, Kyle Ryczko, Kevin Luchak, Iryna Domurad, Adam Beeler, Chris Tamblyn, Isaac |
author_sort | Mills, Kyle |
collection | PubMed |
description | We present a physically-motivated topology of a deep neural network that can efficiently infer extensive parameters (such as energy, entropy, or number of particles) of arbitrarily large systems, doing so with [Image: see text] scaling. We use a form of domain decomposition for training and inference, where each sub-domain (tile) is comprised of a non-overlapping focus region surrounded by an overlapping context region. The size of these regions is motivated by the physical interaction length scales of the problem. We demonstrate the application of EDNNs to three physical systems: the Ising model and two hexagonal/graphene-like datasets. In the latter, an EDNN was able to make total energy predictions of a 60 atoms system, with comparable accuracy to density functional theory (DFT), in 57 milliseconds. Additionally EDNNs are well suited for massively parallel evaluation, as no communication is necessary during neural network evaluation. We demonstrate that EDNNs can be used to make an energy prediction of a two-dimensional 35.2 million atom system, over 1.0 μm(2) of material, at an accuracy comparable to DFT, in under 25 minutes. Such a system exists on a length scale visible with optical microscopy and larger than some living organisms. |
format | Online Article Text |
id | pubmed-6460955 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-64609552019-04-23 Extensive deep neural networks for transferring small scale learning to large scale systems Mills, Kyle Ryczko, Kevin Luchak, Iryna Domurad, Adam Beeler, Chris Tamblyn, Isaac Chem Sci Chemistry We present a physically-motivated topology of a deep neural network that can efficiently infer extensive parameters (such as energy, entropy, or number of particles) of arbitrarily large systems, doing so with [Image: see text] scaling. We use a form of domain decomposition for training and inference, where each sub-domain (tile) is comprised of a non-overlapping focus region surrounded by an overlapping context region. The size of these regions is motivated by the physical interaction length scales of the problem. We demonstrate the application of EDNNs to three physical systems: the Ising model and two hexagonal/graphene-like datasets. In the latter, an EDNN was able to make total energy predictions of a 60 atoms system, with comparable accuracy to density functional theory (DFT), in 57 milliseconds. Additionally EDNNs are well suited for massively parallel evaluation, as no communication is necessary during neural network evaluation. We demonstrate that EDNNs can be used to make an energy prediction of a two-dimensional 35.2 million atom system, over 1.0 μm(2) of material, at an accuracy comparable to DFT, in under 25 minutes. Such a system exists on a length scale visible with optical microscopy and larger than some living organisms. Royal Society of Chemistry 2019-03-20 /pmc/articles/PMC6460955/ /pubmed/31015950 http://dx.doi.org/10.1039/c8sc04578j Text en This journal is © The Royal Society of Chemistry 2019 http://creativecommons.org/licenses/by/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution 3.0 Unported Licence (CC BY 3.0) |
spellingShingle | Chemistry Mills, Kyle Ryczko, Kevin Luchak, Iryna Domurad, Adam Beeler, Chris Tamblyn, Isaac Extensive deep neural networks for transferring small scale learning to large scale systems |
title | Extensive deep neural networks for transferring small scale learning to large scale systems |
title_full | Extensive deep neural networks for transferring small scale learning to large scale systems |
title_fullStr | Extensive deep neural networks for transferring small scale learning to large scale systems |
title_full_unstemmed | Extensive deep neural networks for transferring small scale learning to large scale systems |
title_short | Extensive deep neural networks for transferring small scale learning to large scale systems |
title_sort | extensive deep neural networks for transferring small scale learning to large scale systems |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6460955/ https://www.ncbi.nlm.nih.gov/pubmed/31015950 http://dx.doi.org/10.1039/c8sc04578j |
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