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The R package Rsubread is easier, faster, cheaper and better for alignment and quantification of RNA sequencing reads

We present Rsubread, a Bioconductor software package that provides high-performance alignment and read counting functions for RNA-seq reads. Rsubread is based on the successful Subread suite with the added ease-of-use of the R programming environment, creating a matrix of read counts directly as an...

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Detalles Bibliográficos
Autores principales: Liao, Yang, Smyth, Gordon K, Shi, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6486549/
https://www.ncbi.nlm.nih.gov/pubmed/30783653
http://dx.doi.org/10.1093/nar/gkz114