Cargando…
Identification of spatially associated subpopulations by combining scRNA-seq and sequential fluorescence in situ hybridization data
How intrinsic gene-regulatory networks interact with a cell’s spatial environment to define its identity remains poorly understood. Here we present an approach to distinguish intrinsic and extrinsic effects on global gene expression by integrating analysis of sequencing-based and imaging-based singl...
Autores principales: | Zhu, Qian, Shah, Sheel, Dries, Ruben, Cai, Long, Yuan, Guo-Cheng |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6488461/ https://www.ncbi.nlm.nih.gov/pubmed/30371680 http://dx.doi.org/10.1038/nbt.4260 |
Ejemplares similares
-
Novel Human Meningioma Organoids Recapitulate the Aggressiveness of the Initiating Cell Subpopulations Identified by ScRNA‐Seq
por: Huang, Meng, et al.
Publicado: (2023) -
SpaGE: Spatial Gene Enhancement using scRNA-seq
por: Abdelaal, Tamim, et al.
Publicado: (2020) -
ScRNA-seq and ST-seq in liver research
por: He, Jia, et al.
Publicado: (2023) -
Identification of cell subpopulations associated with disease phenotypes from scRNA-seq data using PACSI
por: Liu, Chonghui, et al.
Publicado: (2023) -
Cell-type-specific densities in mouse somatosensory cortex derived from scRNA-seq and in situ RNA hybridization
por: Keller, Daniel, et al.
Publicado: (2023)