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Estimating parameters of nonlinear dynamic systems in pharmacology using chaos synchronization and grid search

Bridging fundamental approaches to model optimization for pharmacometricians, systems pharmacologists and statisticians is a critical issue. These fields rely primarily on Maximum Likelihood and Extended Least Squares metrics with iterative estimation of parameters. Our research combines adaptive ch...

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Detalles Bibliográficos
Autores principales: Pillai, Nikhil, Schwartz, Sorell L., Ho, Thang, Dokoumetzidis, Aris, Bies, Robert, Freedman, Immanuel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6491657/
https://www.ncbi.nlm.nih.gov/pubmed/30929120
http://dx.doi.org/10.1007/s10928-019-09629-4
Descripción
Sumario:Bridging fundamental approaches to model optimization for pharmacometricians, systems pharmacologists and statisticians is a critical issue. These fields rely primarily on Maximum Likelihood and Extended Least Squares metrics with iterative estimation of parameters. Our research combines adaptive chaos synchronization and grid search to estimate physiological and pharmacological systems with emergent properties by exploring deterministic methods that are more appropriate and have potentially superior performance than classical numerical approaches, which minimize the sum of squares or maximize the likelihood. We illustrate these issues with an established model of cortisol in human with nonlinear dynamics. The model describes cortisol kinetics over time, including its chaotic oscillations, by a delay differential equation. We demonstrate that chaos synchronization helps to avoid the tendency of the gradient-based optimization algorithms to end up in a local minimum. The subsequent analysis illustrates that the hybrid adaptive chaos synchronization for estimation of linear parameters with coarse-to-fine grid search for optimal values of non-linear parameters can be applied iteratively to accurately estimate parameters and effectively track trajectories for a wide class of noisy chaotic systems. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s10928-019-09629-4) contains supplementary material, which is available to authorized users.