Cargando…

BitterSweet: Building machine learning models for predicting the bitter and sweet taste of small molecules

The dichotomy of sweet and bitter tastes is a salient evolutionary feature of human gustatory system with an innate attraction to sweet taste and aversion to bitterness. A better understanding of molecular correlates of bitter-sweet taste gradient is crucial for identification of natural as well as...

Descripción completa

Detalles Bibliográficos
Autores principales: Tuwani, Rudraksh, Wadhwa, Somin, Bagler, Ganesh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6509165/
https://www.ncbi.nlm.nih.gov/pubmed/31073241
http://dx.doi.org/10.1038/s41598-019-43664-y
_version_ 1783417191961460736
author Tuwani, Rudraksh
Wadhwa, Somin
Bagler, Ganesh
author_facet Tuwani, Rudraksh
Wadhwa, Somin
Bagler, Ganesh
author_sort Tuwani, Rudraksh
collection PubMed
description The dichotomy of sweet and bitter tastes is a salient evolutionary feature of human gustatory system with an innate attraction to sweet taste and aversion to bitterness. A better understanding of molecular correlates of bitter-sweet taste gradient is crucial for identification of natural as well as synthetic compounds of desirable taste on this axis. While previous studies have advanced our understanding of the molecular basis of bitter-sweet taste and contributed models for their identification, there is ample scope to enhance these models by meticulous compilation of bitter-sweet molecules and utilization of a wide spectrum of molecular descriptors. Towards these goals, our study provides a structured compilation of bitter, sweet and tasteless molecules and state-of-the-art machine learning models for bitter-sweet taste prediction (BitterSweet). We compare different sets of molecular descriptors for their predictive performance and further identify important features as well as feature blocks. The utility of BitterSweet models is demonstrated by taste prediction on large specialized chemical sets such as FlavorDB, FooDB, SuperSweet, Super Natural II, DSSTox, and DrugBank. To facilitate future research in this direction, we make all datasets and BitterSweet models publicly available, and present an end-to-end software for bitter-sweet taste prediction based on freely available chemical descriptors.
format Online
Article
Text
id pubmed-6509165
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-65091652019-05-22 BitterSweet: Building machine learning models for predicting the bitter and sweet taste of small molecules Tuwani, Rudraksh Wadhwa, Somin Bagler, Ganesh Sci Rep Article The dichotomy of sweet and bitter tastes is a salient evolutionary feature of human gustatory system with an innate attraction to sweet taste and aversion to bitterness. A better understanding of molecular correlates of bitter-sweet taste gradient is crucial for identification of natural as well as synthetic compounds of desirable taste on this axis. While previous studies have advanced our understanding of the molecular basis of bitter-sweet taste and contributed models for their identification, there is ample scope to enhance these models by meticulous compilation of bitter-sweet molecules and utilization of a wide spectrum of molecular descriptors. Towards these goals, our study provides a structured compilation of bitter, sweet and tasteless molecules and state-of-the-art machine learning models for bitter-sweet taste prediction (BitterSweet). We compare different sets of molecular descriptors for their predictive performance and further identify important features as well as feature blocks. The utility of BitterSweet models is demonstrated by taste prediction on large specialized chemical sets such as FlavorDB, FooDB, SuperSweet, Super Natural II, DSSTox, and DrugBank. To facilitate future research in this direction, we make all datasets and BitterSweet models publicly available, and present an end-to-end software for bitter-sweet taste prediction based on freely available chemical descriptors. Nature Publishing Group UK 2019-05-09 /pmc/articles/PMC6509165/ /pubmed/31073241 http://dx.doi.org/10.1038/s41598-019-43664-y Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Tuwani, Rudraksh
Wadhwa, Somin
Bagler, Ganesh
BitterSweet: Building machine learning models for predicting the bitter and sweet taste of small molecules
title BitterSweet: Building machine learning models for predicting the bitter and sweet taste of small molecules
title_full BitterSweet: Building machine learning models for predicting the bitter and sweet taste of small molecules
title_fullStr BitterSweet: Building machine learning models for predicting the bitter and sweet taste of small molecules
title_full_unstemmed BitterSweet: Building machine learning models for predicting the bitter and sweet taste of small molecules
title_short BitterSweet: Building machine learning models for predicting the bitter and sweet taste of small molecules
title_sort bittersweet: building machine learning models for predicting the bitter and sweet taste of small molecules
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6509165/
https://www.ncbi.nlm.nih.gov/pubmed/31073241
http://dx.doi.org/10.1038/s41598-019-43664-y
work_keys_str_mv AT tuwanirudraksh bittersweetbuildingmachinelearningmodelsforpredictingthebitterandsweettasteofsmallmolecules
AT wadhwasomin bittersweetbuildingmachinelearningmodelsforpredictingthebitterandsweettasteofsmallmolecules
AT baglerganesh bittersweetbuildingmachinelearningmodelsforpredictingthebitterandsweettasteofsmallmolecules