NanoDJ: a Dockerized Jupyter notebook for interactive Oxford Nanopore MinION sequence manipulation and genome assembly

BACKGROUND: The Oxford Nanopore Technologies (ONT) MinION portable sequencer makes it possible to use cutting-edge genomic technologies in the field and the academic classroom. RESULTS: We present NanoDJ, a Jupyter notebook integration of tools for simplified manipulation and assembly of DNA sequenc...

Descripción completa

Detalles Bibliográficos
Autores principales: Rodríguez-Pérez, Héctor, Hernández-Beeftink, Tamara, Lorenzo-Salazar, José M., Roda-García, José L., Pérez-González, Carlos J., Colebrook, Marcos, Flores, Carlos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6509807/
https://www.ncbi.nlm.nih.gov/pubmed/31072312
http://dx.doi.org/10.1186/s12859-019-2860-z

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6509807/
https://www.ncbi.nlm.nih.gov/pubmed/31072312
http://dx.doi.org/10.1186/s12859-019-2860-z

Ejemplares similares