Cargando…

Bacterial succession and functional diversity during vermicomposting of the white grape marc Vitis vinifera v. Albariño

Winemaking produces millions of tons of grape marc, a byproduct of grape pressing, each year. Grape marc is made up of the skins, stalks, and seeds remaining after pressing. Raw grape marc can be hazardous to the environment due to its low pH and high polyphenol content, but previous work has shown...

Descripción completa

Detalles Bibliográficos
Autores principales: Kolbe, Allison R., Aira, Manuel, Gómez-Brandón, María, Pérez-Losada, Marcos, Domínguez, Jorge
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6522490/
https://www.ncbi.nlm.nih.gov/pubmed/31097737
http://dx.doi.org/10.1038/s41598-019-43907-y
_version_ 1783419127114760192
author Kolbe, Allison R.
Aira, Manuel
Gómez-Brandón, María
Pérez-Losada, Marcos
Domínguez, Jorge
author_facet Kolbe, Allison R.
Aira, Manuel
Gómez-Brandón, María
Pérez-Losada, Marcos
Domínguez, Jorge
author_sort Kolbe, Allison R.
collection PubMed
description Winemaking produces millions of tons of grape marc, a byproduct of grape pressing, each year. Grape marc is made up of the skins, stalks, and seeds remaining after pressing. Raw grape marc can be hazardous to the environment due to its low pH and high polyphenol content, but previous work has shown that grape marc can be stabilized via vermicomposting to produce organic fertilizer. Here, we utilize 16S rRNA high-throughput sequencing to characterize the bacterial community composition, diversity and metabolic function during vermicomposting of the white grape marc Vitis vinifera v. Albariño for 91 days. Large, significant changes in the bacterial community composition of grape marc vermicompost were observed by day 7 of vermicomposting and throughout the duration of the experiment until day 91. Similarly, taxonomic and phylogenetic α-diversity increased throughout the experiment and estimates of β-diversity differed significantly between time points. Functional diversity also changed during vermicomposting, including increases in cellulose metabolism, plant hormone synthesis, and antibiotic synthesis. Thus, vermicomposting of white grape marc resulted in a rich, stable bacterial community with functional properties that may aid plant growth. These results support the use of grape marc vermicompost for sustainable agricultural practices in the wine industry.
format Online
Article
Text
id pubmed-6522490
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-65224902019-05-28 Bacterial succession and functional diversity during vermicomposting of the white grape marc Vitis vinifera v. Albariño Kolbe, Allison R. Aira, Manuel Gómez-Brandón, María Pérez-Losada, Marcos Domínguez, Jorge Sci Rep Article Winemaking produces millions of tons of grape marc, a byproduct of grape pressing, each year. Grape marc is made up of the skins, stalks, and seeds remaining after pressing. Raw grape marc can be hazardous to the environment due to its low pH and high polyphenol content, but previous work has shown that grape marc can be stabilized via vermicomposting to produce organic fertilizer. Here, we utilize 16S rRNA high-throughput sequencing to characterize the bacterial community composition, diversity and metabolic function during vermicomposting of the white grape marc Vitis vinifera v. Albariño for 91 days. Large, significant changes in the bacterial community composition of grape marc vermicompost were observed by day 7 of vermicomposting and throughout the duration of the experiment until day 91. Similarly, taxonomic and phylogenetic α-diversity increased throughout the experiment and estimates of β-diversity differed significantly between time points. Functional diversity also changed during vermicomposting, including increases in cellulose metabolism, plant hormone synthesis, and antibiotic synthesis. Thus, vermicomposting of white grape marc resulted in a rich, stable bacterial community with functional properties that may aid plant growth. These results support the use of grape marc vermicompost for sustainable agricultural practices in the wine industry. Nature Publishing Group UK 2019-05-16 /pmc/articles/PMC6522490/ /pubmed/31097737 http://dx.doi.org/10.1038/s41598-019-43907-y Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kolbe, Allison R.
Aira, Manuel
Gómez-Brandón, María
Pérez-Losada, Marcos
Domínguez, Jorge
Bacterial succession and functional diversity during vermicomposting of the white grape marc Vitis vinifera v. Albariño
title Bacterial succession and functional diversity during vermicomposting of the white grape marc Vitis vinifera v. Albariño
title_full Bacterial succession and functional diversity during vermicomposting of the white grape marc Vitis vinifera v. Albariño
title_fullStr Bacterial succession and functional diversity during vermicomposting of the white grape marc Vitis vinifera v. Albariño
title_full_unstemmed Bacterial succession and functional diversity during vermicomposting of the white grape marc Vitis vinifera v. Albariño
title_short Bacterial succession and functional diversity during vermicomposting of the white grape marc Vitis vinifera v. Albariño
title_sort bacterial succession and functional diversity during vermicomposting of the white grape marc vitis vinifera v. albariño
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6522490/
https://www.ncbi.nlm.nih.gov/pubmed/31097737
http://dx.doi.org/10.1038/s41598-019-43907-y
work_keys_str_mv AT kolbeallisonr bacterialsuccessionandfunctionaldiversityduringvermicompostingofthewhitegrapemarcvitisviniferavalbarino
AT airamanuel bacterialsuccessionandfunctionaldiversityduringvermicompostingofthewhitegrapemarcvitisviniferavalbarino
AT gomezbrandonmaria bacterialsuccessionandfunctionaldiversityduringvermicompostingofthewhitegrapemarcvitisviniferavalbarino
AT perezlosadamarcos bacterialsuccessionandfunctionaldiversityduringvermicompostingofthewhitegrapemarcvitisviniferavalbarino
AT dominguezjorge bacterialsuccessionandfunctionaldiversityduringvermicompostingofthewhitegrapemarcvitisviniferavalbarino