Cargando…

Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage

HIV-infected infants develop broadly neutralizing plasma responses with more rapid kinetics than adults, suggesting the ontogeny of infant responses could better inform a path to achievable vaccine targets. Here we reconstruct the developmental lineage of BF520.1, an infant-derived HIV-specific broa...

Descripción completa

Detalles Bibliográficos
Autores principales: Simonich, Cassandra A., Doepker, Laura, Ralph, Duncan, Williams, James A., Dhar, Amrit, Yaffe, Zak, Gentles, Lauren, Small, Christopher T., Oliver, Brian, Vigdorovich, Vladimir, Mangala Prasad, Vidya, Nduati, Ruth, Sather, D. Noah, Lee, Kelly K., Matsen IV, Frederick A., Overbaugh, Julie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6522554/
https://www.ncbi.nlm.nih.gov/pubmed/31097697
http://dx.doi.org/10.1038/s41467-019-09481-7
_version_ 1783419142663045120
author Simonich, Cassandra A.
Doepker, Laura
Ralph, Duncan
Williams, James A.
Dhar, Amrit
Yaffe, Zak
Gentles, Lauren
Small, Christopher T.
Oliver, Brian
Vigdorovich, Vladimir
Mangala Prasad, Vidya
Nduati, Ruth
Sather, D. Noah
Lee, Kelly K.
Matsen IV, Frederick A.
Overbaugh, Julie
author_facet Simonich, Cassandra A.
Doepker, Laura
Ralph, Duncan
Williams, James A.
Dhar, Amrit
Yaffe, Zak
Gentles, Lauren
Small, Christopher T.
Oliver, Brian
Vigdorovich, Vladimir
Mangala Prasad, Vidya
Nduati, Ruth
Sather, D. Noah
Lee, Kelly K.
Matsen IV, Frederick A.
Overbaugh, Julie
author_sort Simonich, Cassandra A.
collection PubMed
description HIV-infected infants develop broadly neutralizing plasma responses with more rapid kinetics than adults, suggesting the ontogeny of infant responses could better inform a path to achievable vaccine targets. Here we reconstruct the developmental lineage of BF520.1, an infant-derived HIV-specific broadly neutralizing antibody (bnAb), using computational methods developed specifically for this purpose. We find that the BF520.1 inferred naive precursor binds HIV Env. We also show that heterologous cross-clade neutralizing activity evolved in the infant within six months of infection and that, ultimately, only 2% SHM is needed to achieve the full breadth of the mature antibody. Mutagenesis and structural analyses reveal that, for this infant bnAb, substitutions in the kappa chain were critical for activity, particularly in CDRL1. Overall, the developmental pathway of this infant antibody includes features distinct from adult antibodies, including several that may be amenable to better vaccine responses.
format Online
Article
Text
id pubmed-6522554
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-65225542019-05-20 Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage Simonich, Cassandra A. Doepker, Laura Ralph, Duncan Williams, James A. Dhar, Amrit Yaffe, Zak Gentles, Lauren Small, Christopher T. Oliver, Brian Vigdorovich, Vladimir Mangala Prasad, Vidya Nduati, Ruth Sather, D. Noah Lee, Kelly K. Matsen IV, Frederick A. Overbaugh, Julie Nat Commun Article HIV-infected infants develop broadly neutralizing plasma responses with more rapid kinetics than adults, suggesting the ontogeny of infant responses could better inform a path to achievable vaccine targets. Here we reconstruct the developmental lineage of BF520.1, an infant-derived HIV-specific broadly neutralizing antibody (bnAb), using computational methods developed specifically for this purpose. We find that the BF520.1 inferred naive precursor binds HIV Env. We also show that heterologous cross-clade neutralizing activity evolved in the infant within six months of infection and that, ultimately, only 2% SHM is needed to achieve the full breadth of the mature antibody. Mutagenesis and structural analyses reveal that, for this infant bnAb, substitutions in the kappa chain were critical for activity, particularly in CDRL1. Overall, the developmental pathway of this infant antibody includes features distinct from adult antibodies, including several that may be amenable to better vaccine responses. Nature Publishing Group UK 2019-05-16 /pmc/articles/PMC6522554/ /pubmed/31097697 http://dx.doi.org/10.1038/s41467-019-09481-7 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Simonich, Cassandra A.
Doepker, Laura
Ralph, Duncan
Williams, James A.
Dhar, Amrit
Yaffe, Zak
Gentles, Lauren
Small, Christopher T.
Oliver, Brian
Vigdorovich, Vladimir
Mangala Prasad, Vidya
Nduati, Ruth
Sather, D. Noah
Lee, Kelly K.
Matsen IV, Frederick A.
Overbaugh, Julie
Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage
title Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage
title_full Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage
title_fullStr Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage
title_full_unstemmed Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage
title_short Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage
title_sort kappa chain maturation helps drive rapid development of an infant hiv-1 broadly neutralizing antibody lineage
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6522554/
https://www.ncbi.nlm.nih.gov/pubmed/31097697
http://dx.doi.org/10.1038/s41467-019-09481-7
work_keys_str_mv AT simonichcassandraa kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT doepkerlaura kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT ralphduncan kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT williamsjamesa kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT dharamrit kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT yaffezak kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT gentleslauren kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT smallchristophert kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT oliverbrian kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT vigdorovichvladimir kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT mangalaprasadvidya kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT nduatiruth kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT satherdnoah kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT leekellyk kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT matsenivfredericka kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage
AT overbaughjulie kappachainmaturationhelpsdriverapiddevelopmentofaninfanthiv1broadlyneutralizingantibodylineage