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ChiCMaxima: a robust and simple pipeline for detection and visualization of chromatin looping in Capture Hi-C

Capture Hi-C (CHi-C) is a new technique for assessing genome organization based on chromosome conformation capture coupled to oligonucleotide capture of regions of interest, such as gene promoters. Chromatin loop detection is challenging because existing Hi-C/4C-like tools, which make different assu...

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Detalles Bibliográficos
Autores principales: Ben Zouari, Yousra, Molitor, Anne M., Sikorska, Natalia, Pancaldi, Vera, Sexton, Tom
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6532271/
https://www.ncbi.nlm.nih.gov/pubmed/31118054
http://dx.doi.org/10.1186/s13059-019-1706-3