NG-meta-profiler: fast processing of metagenomes using NGLess, a domain-specific language

BACKGROUND: Shotgun metagenomes contain a sample of all the genomic material in an environment, allowing for the characterization of a microbial community. In order to understand these communities, bioinformatics methods are crucial. A common first step in processing metagenomes is to compute abunda...

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Detalles Bibliográficos
Autores principales: Coelho, Luis Pedro, Alves, Renato, Monteiro, Paulo, Huerta-Cepas, Jaime, Freitas, Ana Teresa, Bork, Peer
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6547473/
https://www.ncbi.nlm.nih.gov/pubmed/31159881
http://dx.doi.org/10.1186/s40168-019-0684-8

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6547473/
https://www.ncbi.nlm.nih.gov/pubmed/31159881
http://dx.doi.org/10.1186/s40168-019-0684-8

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