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Regions of homozygosity as risk factors for multiple myeloma
Genomic regions of homozygosity (ROH), detectable in outbred populations, have been implicated as determinants of inherited risk. To examine whether ROH is associated with risk of multiple myeloma (MM), we performed whole‐genome homozygosity analysis using single‐nucleotide polymorphism genotype dat...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6563058/ https://www.ncbi.nlm.nih.gov/pubmed/30768683 http://dx.doi.org/10.1111/ahg.12304 |
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author | Went, Molly Sud, Amit Li, Ni Johnson, David C. Mitchell, Jonathan S. Kaiser, Martin Houlston, Richard S. |
author_facet | Went, Molly Sud, Amit Li, Ni Johnson, David C. Mitchell, Jonathan S. Kaiser, Martin Houlston, Richard S. |
author_sort | Went, Molly |
collection | PubMed |
description | Genomic regions of homozygosity (ROH), detectable in outbred populations, have been implicated as determinants of inherited risk. To examine whether ROH is associated with risk of multiple myeloma (MM), we performed whole‐genome homozygosity analysis using single‐nucleotide polymorphism genotype data from 2,282 MM cases and 5,197 controls, with replication in an additional 878 MM cases and 7,083 controls. Globally, the distribution of ROH between cases and controls was not significantly different. However, one ROH at chromosome 9q21, harboring the B‐cell transcription factor gene KLF9, showed evidence of a consistent association and may therefore warrant further investigation as a candidate risk factor for MM. Overall, our analysis provides little support for a homozygosity signature being a significant factor in MM risk. |
format | Online Article Text |
id | pubmed-6563058 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-65630582019-06-17 Regions of homozygosity as risk factors for multiple myeloma Went, Molly Sud, Amit Li, Ni Johnson, David C. Mitchell, Jonathan S. Kaiser, Martin Houlston, Richard S. Ann Hum Genet Original Articles Genomic regions of homozygosity (ROH), detectable in outbred populations, have been implicated as determinants of inherited risk. To examine whether ROH is associated with risk of multiple myeloma (MM), we performed whole‐genome homozygosity analysis using single‐nucleotide polymorphism genotype data from 2,282 MM cases and 5,197 controls, with replication in an additional 878 MM cases and 7,083 controls. Globally, the distribution of ROH between cases and controls was not significantly different. However, one ROH at chromosome 9q21, harboring the B‐cell transcription factor gene KLF9, showed evidence of a consistent association and may therefore warrant further investigation as a candidate risk factor for MM. Overall, our analysis provides little support for a homozygosity signature being a significant factor in MM risk. John Wiley and Sons Inc. 2019-02-15 2019-07 /pmc/articles/PMC6563058/ /pubmed/30768683 http://dx.doi.org/10.1111/ahg.12304 Text en © 2019 The Authors. Annals of Human Genetics published by University College London (UCL) and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Went, Molly Sud, Amit Li, Ni Johnson, David C. Mitchell, Jonathan S. Kaiser, Martin Houlston, Richard S. Regions of homozygosity as risk factors for multiple myeloma |
title | Regions of homozygosity as risk factors for multiple myeloma |
title_full | Regions of homozygosity as risk factors for multiple myeloma |
title_fullStr | Regions of homozygosity as risk factors for multiple myeloma |
title_full_unstemmed | Regions of homozygosity as risk factors for multiple myeloma |
title_short | Regions of homozygosity as risk factors for multiple myeloma |
title_sort | regions of homozygosity as risk factors for multiple myeloma |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6563058/ https://www.ncbi.nlm.nih.gov/pubmed/30768683 http://dx.doi.org/10.1111/ahg.12304 |
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