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Widely applicable background depletion step enables transaminase evolution through solid-phase screening
Directed evolution of transaminases is a widespread technique in the development of highly sought-after biocatalysts for industrial applications. This process, however, is challenged by the limited availability of effective high-throughput protocols to evaluate mutant libraries. Here we report a rap...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6566068/ https://www.ncbi.nlm.nih.gov/pubmed/31360401 http://dx.doi.org/10.1039/c8sc05712e |
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author | Planchestainer, Matteo Hegarty, Eimear Heckmann, Christian M. Gourlay, Louise J. Paradisi, Francesca |
author_facet | Planchestainer, Matteo Hegarty, Eimear Heckmann, Christian M. Gourlay, Louise J. Paradisi, Francesca |
author_sort | Planchestainer, Matteo |
collection | PubMed |
description | Directed evolution of transaminases is a widespread technique in the development of highly sought-after biocatalysts for industrial applications. This process, however, is challenged by the limited availability of effective high-throughput protocols to evaluate mutant libraries. Here we report a rapid, reliable, and widely applicable background depletion method for solid-phase screening of transaminase variants, which was successfully applied to a transaminase from Halomonas elongata (HEWT), evolved through rounds of random mutagenesis towards a series of diverse prochiral ketones. This approach enabled the identification of transaminase variants in viable cells with significantly improved activity towards para-substituted acetophenones (up to 60-fold), as well as tetrahydrothiophen-3-one and related substrates. Rationalisation of the mutants was assisted by determination of the high-resolution wild-type HEWT crystal structure presented herein. |
format | Online Article Text |
id | pubmed-6566068 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-65660682019-07-29 Widely applicable background depletion step enables transaminase evolution through solid-phase screening Planchestainer, Matteo Hegarty, Eimear Heckmann, Christian M. Gourlay, Louise J. Paradisi, Francesca Chem Sci Chemistry Directed evolution of transaminases is a widespread technique in the development of highly sought-after biocatalysts for industrial applications. This process, however, is challenged by the limited availability of effective high-throughput protocols to evaluate mutant libraries. Here we report a rapid, reliable, and widely applicable background depletion method for solid-phase screening of transaminase variants, which was successfully applied to a transaminase from Halomonas elongata (HEWT), evolved through rounds of random mutagenesis towards a series of diverse prochiral ketones. This approach enabled the identification of transaminase variants in viable cells with significantly improved activity towards para-substituted acetophenones (up to 60-fold), as well as tetrahydrothiophen-3-one and related substrates. Rationalisation of the mutants was assisted by determination of the high-resolution wild-type HEWT crystal structure presented herein. Royal Society of Chemistry 2019-05-09 /pmc/articles/PMC6566068/ /pubmed/31360401 http://dx.doi.org/10.1039/c8sc05712e Text en This journal is © The Royal Society of Chemistry 2019 http://creativecommons.org/licenses/by-nc/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported Licence (CC BY-NC 3.0) |
spellingShingle | Chemistry Planchestainer, Matteo Hegarty, Eimear Heckmann, Christian M. Gourlay, Louise J. Paradisi, Francesca Widely applicable background depletion step enables transaminase evolution through solid-phase screening |
title | Widely applicable background depletion step enables transaminase evolution through solid-phase screening
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title_full | Widely applicable background depletion step enables transaminase evolution through solid-phase screening
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title_fullStr | Widely applicable background depletion step enables transaminase evolution through solid-phase screening
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title_full_unstemmed | Widely applicable background depletion step enables transaminase evolution through solid-phase screening
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title_short | Widely applicable background depletion step enables transaminase evolution through solid-phase screening
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title_sort | widely applicable background depletion step enables transaminase evolution through solid-phase screening |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6566068/ https://www.ncbi.nlm.nih.gov/pubmed/31360401 http://dx.doi.org/10.1039/c8sc05712e |
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