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Metabolic reprogramming dynamics in tumor spheroids: Insights from a multicellular, multiscale model
Mathematical modeling provides the predictive ability to understand the metabolic reprogramming and complex pathways that mediate cancer cells’ proliferation. We present a mathematical model using a multiscale, multicellular approach to simulate avascular tumor growth, applied to pancreatic cancer....
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6588258/ https://www.ncbi.nlm.nih.gov/pubmed/31185009 http://dx.doi.org/10.1371/journal.pcbi.1007053 |
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author | Roy, Mahua Finley, Stacey D. |
author_facet | Roy, Mahua Finley, Stacey D. |
author_sort | Roy, Mahua |
collection | PubMed |
description | Mathematical modeling provides the predictive ability to understand the metabolic reprogramming and complex pathways that mediate cancer cells’ proliferation. We present a mathematical model using a multiscale, multicellular approach to simulate avascular tumor growth, applied to pancreatic cancer. The model spans three distinct spatial and temporal scales. At the extracellular level, reaction diffusion equations describe nutrient concentrations over a span of seconds. At the cellular level, a lattice-based energy driven stochastic approach describes cellular phenomena including adhesion, proliferation, viability and cell state transitions, occurring on the timescale of hours. At the sub-cellular level, we incorporate a detailed kinetic model of intracellular metabolite dynamics on the timescale of minutes, which enables the cells to uptake and excrete metabolites and use the metabolites to generate energy and building blocks for cell growth. This is a particularly novel aspect of the model. Certain defined criteria for the concentrations of intracellular metabolites lead to cancer cell growth, proliferation or death. Overall, we model the evolution of the tumor in both time and space. Starting with a cluster of tumor cells, the model produces an avascular tumor that quantitatively and qualitatively mimics experimental measurements of multicellular tumor spheroids. Through our model simulations, we can investigate the response of individual intracellular species under a metabolic perturbation and investigate how that response contributes to the response of the tumor as a whole. The predicted response of intracellular metabolites under various targeted strategies are difficult to resolve with experimental techniques. Thus, the model can give novel predictions as to the response of the tumor as a whole, identifies potential therapies to impede tumor growth, and predicts the effects of those therapeutic strategies. In particular, the model provides quantitative insight into the dynamic reprogramming of tumor cells at the intracellular level in response to specific metabolic perturbations. Overall, the model is a useful framework to study targeted metabolic strategies for inhibiting tumor growth. |
format | Online Article Text |
id | pubmed-6588258 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-65882582019-06-28 Metabolic reprogramming dynamics in tumor spheroids: Insights from a multicellular, multiscale model Roy, Mahua Finley, Stacey D. PLoS Comput Biol Research Article Mathematical modeling provides the predictive ability to understand the metabolic reprogramming and complex pathways that mediate cancer cells’ proliferation. We present a mathematical model using a multiscale, multicellular approach to simulate avascular tumor growth, applied to pancreatic cancer. The model spans three distinct spatial and temporal scales. At the extracellular level, reaction diffusion equations describe nutrient concentrations over a span of seconds. At the cellular level, a lattice-based energy driven stochastic approach describes cellular phenomena including adhesion, proliferation, viability and cell state transitions, occurring on the timescale of hours. At the sub-cellular level, we incorporate a detailed kinetic model of intracellular metabolite dynamics on the timescale of minutes, which enables the cells to uptake and excrete metabolites and use the metabolites to generate energy and building blocks for cell growth. This is a particularly novel aspect of the model. Certain defined criteria for the concentrations of intracellular metabolites lead to cancer cell growth, proliferation or death. Overall, we model the evolution of the tumor in both time and space. Starting with a cluster of tumor cells, the model produces an avascular tumor that quantitatively and qualitatively mimics experimental measurements of multicellular tumor spheroids. Through our model simulations, we can investigate the response of individual intracellular species under a metabolic perturbation and investigate how that response contributes to the response of the tumor as a whole. The predicted response of intracellular metabolites under various targeted strategies are difficult to resolve with experimental techniques. Thus, the model can give novel predictions as to the response of the tumor as a whole, identifies potential therapies to impede tumor growth, and predicts the effects of those therapeutic strategies. In particular, the model provides quantitative insight into the dynamic reprogramming of tumor cells at the intracellular level in response to specific metabolic perturbations. Overall, the model is a useful framework to study targeted metabolic strategies for inhibiting tumor growth. Public Library of Science 2019-06-11 /pmc/articles/PMC6588258/ /pubmed/31185009 http://dx.doi.org/10.1371/journal.pcbi.1007053 Text en © 2019 Roy, Finley http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Roy, Mahua Finley, Stacey D. Metabolic reprogramming dynamics in tumor spheroids: Insights from a multicellular, multiscale model |
title | Metabolic reprogramming dynamics in tumor spheroids: Insights from a multicellular, multiscale model |
title_full | Metabolic reprogramming dynamics in tumor spheroids: Insights from a multicellular, multiscale model |
title_fullStr | Metabolic reprogramming dynamics in tumor spheroids: Insights from a multicellular, multiscale model |
title_full_unstemmed | Metabolic reprogramming dynamics in tumor spheroids: Insights from a multicellular, multiscale model |
title_short | Metabolic reprogramming dynamics in tumor spheroids: Insights from a multicellular, multiscale model |
title_sort | metabolic reprogramming dynamics in tumor spheroids: insights from a multicellular, multiscale model |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6588258/ https://www.ncbi.nlm.nih.gov/pubmed/31185009 http://dx.doi.org/10.1371/journal.pcbi.1007053 |
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