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Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation

Plasmodium actins form very short filaments and have a noncanonical link between ATP hydrolysis and polymerization. Long filaments are detrimental to the parasites, but the structural factors constraining Plasmodium microfilament lengths have remained unknown. Using high-resolution crystallography,...

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Autores principales: Kumpula, Esa-Pekka, Lopez, Andrea J., Tajedin, Leila, Han, Huijong, Kursula, Inari
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6599135/
https://www.ncbi.nlm.nih.gov/pubmed/31199804
http://dx.doi.org/10.1371/journal.pbio.3000315
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author Kumpula, Esa-Pekka
Lopez, Andrea J.
Tajedin, Leila
Han, Huijong
Kursula, Inari
author_facet Kumpula, Esa-Pekka
Lopez, Andrea J.
Tajedin, Leila
Han, Huijong
Kursula, Inari
author_sort Kumpula, Esa-Pekka
collection PubMed
description Plasmodium actins form very short filaments and have a noncanonical link between ATP hydrolysis and polymerization. Long filaments are detrimental to the parasites, but the structural factors constraining Plasmodium microfilament lengths have remained unknown. Using high-resolution crystallography, we show that magnesium binding causes a slight flattening of the Plasmodium actin I monomer, and subsequent phosphate release results in a more twisted conformation. Thus, the Mg-bound monomer is closer in conformation to filamentous (F) actin than the Ca form, and this likely facilitates polymerization. A coordinated potassium ion resides in the active site during hydrolysis and leaves together with the phosphate, a process governed by the position of the Arg178/Asp180-containing A loop. Asp180 interacts with either Lys270 or His74, depending on the protonation state of the histidine, while Arg178 links the inner and outer domains (ID and OD) of the actin protomer. Hence, the A loop acts as a switch between stable and unstable filament conformations, the latter leading to fragmentation. Our data provide a comprehensive model for polymerization, ATP hydrolysis and phosphate release, and fragmentation of parasite microfilaments. Similar mechanisms may well exist in canonical actins, although fragmentation is much less favorable due to several subtle sequence differences as well as the methylation of His73, which is absent on the corresponding His74 in Plasmodium actin I.
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spelling pubmed-65991352019-07-12 Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation Kumpula, Esa-Pekka Lopez, Andrea J. Tajedin, Leila Han, Huijong Kursula, Inari PLoS Biol Research Article Plasmodium actins form very short filaments and have a noncanonical link between ATP hydrolysis and polymerization. Long filaments are detrimental to the parasites, but the structural factors constraining Plasmodium microfilament lengths have remained unknown. Using high-resolution crystallography, we show that magnesium binding causes a slight flattening of the Plasmodium actin I monomer, and subsequent phosphate release results in a more twisted conformation. Thus, the Mg-bound monomer is closer in conformation to filamentous (F) actin than the Ca form, and this likely facilitates polymerization. A coordinated potassium ion resides in the active site during hydrolysis and leaves together with the phosphate, a process governed by the position of the Arg178/Asp180-containing A loop. Asp180 interacts with either Lys270 or His74, depending on the protonation state of the histidine, while Arg178 links the inner and outer domains (ID and OD) of the actin protomer. Hence, the A loop acts as a switch between stable and unstable filament conformations, the latter leading to fragmentation. Our data provide a comprehensive model for polymerization, ATP hydrolysis and phosphate release, and fragmentation of parasite microfilaments. Similar mechanisms may well exist in canonical actins, although fragmentation is much less favorable due to several subtle sequence differences as well as the methylation of His73, which is absent on the corresponding His74 in Plasmodium actin I. Public Library of Science 2019-06-14 /pmc/articles/PMC6599135/ /pubmed/31199804 http://dx.doi.org/10.1371/journal.pbio.3000315 Text en © 2019 Kumpula et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kumpula, Esa-Pekka
Lopez, Andrea J.
Tajedin, Leila
Han, Huijong
Kursula, Inari
Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation
title Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation
title_full Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation
title_fullStr Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation
title_full_unstemmed Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation
title_short Atomic view into Plasmodium actin polymerization, ATP hydrolysis, and fragmentation
title_sort atomic view into plasmodium actin polymerization, atp hydrolysis, and fragmentation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6599135/
https://www.ncbi.nlm.nih.gov/pubmed/31199804
http://dx.doi.org/10.1371/journal.pbio.3000315
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