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Large scale microbiome profiling in the cloud

MOTIVATION: Bacterial metagenomics profiling for metagenomic whole sequencing (mWGS) usually starts by aligning sequencing reads to a collection of reference genomes. Current profiling tools are designed to work against a small representative collection of genomes, and do not scale very well to larg...

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Detalles Bibliográficos
Autores principales: Valdes, Camilo, Stebliankin, Vitalii, Narasimhan, Giri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612844/
https://www.ncbi.nlm.nih.gov/pubmed/31510682
http://dx.doi.org/10.1093/bioinformatics/btz356