Building large updatable colored de Bruijn graphs via merging

MOTIVATION: There exist several large genomic and metagenomic data collection efforts, including GenomeTrakr and MetaSub, which are routinely updated with new data. To analyze such datasets, memory-efficient methods to construct and store the colored de Bruijn graph were developed. Yet, a problem th...

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Detalles Bibliográficos
Autores principales: Muggli, Martin D, Alipanahi, Bahar, Boucher, Christina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Ismb/Eccb 2019 Conference Proceedings
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612864/
https://www.ncbi.nlm.nih.gov/pubmed/31510647
http://dx.doi.org/10.1093/bioinformatics/btz350

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612864/
https://www.ncbi.nlm.nih.gov/pubmed/31510647
http://dx.doi.org/10.1093/bioinformatics/btz350

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