Alfred: interactive multi-sample BAM alignment statistics, feature counting and feature annotation for long- and short-read sequencing

SUMMARY: Harmonizing quality control (QC) of large-scale second and third-generation sequencing datasets is key for enabling downstream computational and biological analyses. We present Alfred, an efficient and versatile command-line application that computes multi-sample QC metrics in a read-group...

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Detalles Bibliográficos
Autores principales: Rausch, Tobias, Hsi-Yang Fritz, Markus, Korbel, Jan O, Benes, Vladimir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612896/
https://www.ncbi.nlm.nih.gov/pubmed/30520945
http://dx.doi.org/10.1093/bioinformatics/bty1007

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6612896/
https://www.ncbi.nlm.nih.gov/pubmed/30520945
http://dx.doi.org/10.1093/bioinformatics/bty1007

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