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A step-by-step guide to analyzing CAGE data using R/Bioconductor

Cap Analysis of Gene Expression (CAGE) is one of the most popular 5'-end sequencing methods. In a single experiment, CAGE can be used to locate and quantify the expression of both Transcription Start Sites (TSSs) and enhancers. This is workflow is a case study on how to use the CAGEfightR packa...

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Detalles Bibliográficos
Autores principales: Thodberg, Malte, Sandelin, Albin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6613478/
https://www.ncbi.nlm.nih.gov/pubmed/31327999
http://dx.doi.org/10.12688/f1000research.18456.1