Cargando…
MRI-based radiomics signature is a quantitative prognostic biomarker for nasopharyngeal carcinoma
This study aimed to develop prognosis signatures through a radiomics analysis for patients with nasopharyngeal carcinoma (NPC) by their pretreatment diagnosis magnetic resonance imaging (MRI). A total of 208 radiomics features were extracted for each patient from a database of 303 patients. The pati...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6639299/ https://www.ncbi.nlm.nih.gov/pubmed/31320729 http://dx.doi.org/10.1038/s41598-019-46985-0 |
_version_ | 1783436435212206080 |
---|---|
author | Ming, Xue Oei, Ronald Wihal Zhai, Ruiping Kong, Fangfang Du, Chengrun Hu, Chaosu Hu, Weigang Zhang, Zhen Ying, Hongmei Wang, Jiazhou |
author_facet | Ming, Xue Oei, Ronald Wihal Zhai, Ruiping Kong, Fangfang Du, Chengrun Hu, Chaosu Hu, Weigang Zhang, Zhen Ying, Hongmei Wang, Jiazhou |
author_sort | Ming, Xue |
collection | PubMed |
description | This study aimed to develop prognosis signatures through a radiomics analysis for patients with nasopharyngeal carcinoma (NPC) by their pretreatment diagnosis magnetic resonance imaging (MRI). A total of 208 radiomics features were extracted for each patient from a database of 303 patients. The patients were split into the training and validation cohorts according to their pretreatment diagnosis date. The radiomics feature analysis consisted of cluster analysis and prognosis model analysis for disease free-survival (DFS), overall survival (OS), distant metastasis-free survival (DMFS) and locoregional recurrence-free survival (LRFS). Additionally, two prognosis models using clinical features only and combined radiomics and clinical features were generated to estimate the incremental prognostic value of radiomics features. Patients were clustered by non-negative matrix factorization (NMF) into two groups. It showed high correspondence with patients’ T stage (p < 0.00001) and overall stage information (p < 0.00001) by chi-squared tests. There were significant differences in DFS (p = 0.0052), OS (p = 0.033), and LRFS (p = 0.037) between the two clustered groups but not in DMFS (p = 0.11) by log-rank tests. Radiomics nomograms that incorporated radiomics and clinical features could estimate DFS with the C-index of 0.751 [0.639, 0.863] and OS with the C-index of 0.845 [0.752, 0.939] in the validation cohort. The nomograms improved the prediction accuracy with the C-index value of 0.029 for DFS and 0.107 for OS compared with clinical features only. The DFS and OS radiomics nomograms developed in our study demonstrated the excellent prognostic estimation for NPC patients with a noninvasive way of MRI. The combination of clinical and radiomics features can provide more information for precise treatment decision. |
format | Online Article Text |
id | pubmed-6639299 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-66392992019-07-25 MRI-based radiomics signature is a quantitative prognostic biomarker for nasopharyngeal carcinoma Ming, Xue Oei, Ronald Wihal Zhai, Ruiping Kong, Fangfang Du, Chengrun Hu, Chaosu Hu, Weigang Zhang, Zhen Ying, Hongmei Wang, Jiazhou Sci Rep Article This study aimed to develop prognosis signatures through a radiomics analysis for patients with nasopharyngeal carcinoma (NPC) by their pretreatment diagnosis magnetic resonance imaging (MRI). A total of 208 radiomics features were extracted for each patient from a database of 303 patients. The patients were split into the training and validation cohorts according to their pretreatment diagnosis date. The radiomics feature analysis consisted of cluster analysis and prognosis model analysis for disease free-survival (DFS), overall survival (OS), distant metastasis-free survival (DMFS) and locoregional recurrence-free survival (LRFS). Additionally, two prognosis models using clinical features only and combined radiomics and clinical features were generated to estimate the incremental prognostic value of radiomics features. Patients were clustered by non-negative matrix factorization (NMF) into two groups. It showed high correspondence with patients’ T stage (p < 0.00001) and overall stage information (p < 0.00001) by chi-squared tests. There were significant differences in DFS (p = 0.0052), OS (p = 0.033), and LRFS (p = 0.037) between the two clustered groups but not in DMFS (p = 0.11) by log-rank tests. Radiomics nomograms that incorporated radiomics and clinical features could estimate DFS with the C-index of 0.751 [0.639, 0.863] and OS with the C-index of 0.845 [0.752, 0.939] in the validation cohort. The nomograms improved the prediction accuracy with the C-index value of 0.029 for DFS and 0.107 for OS compared with clinical features only. The DFS and OS radiomics nomograms developed in our study demonstrated the excellent prognostic estimation for NPC patients with a noninvasive way of MRI. The combination of clinical and radiomics features can provide more information for precise treatment decision. Nature Publishing Group UK 2019-07-18 /pmc/articles/PMC6639299/ /pubmed/31320729 http://dx.doi.org/10.1038/s41598-019-46985-0 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Ming, Xue Oei, Ronald Wihal Zhai, Ruiping Kong, Fangfang Du, Chengrun Hu, Chaosu Hu, Weigang Zhang, Zhen Ying, Hongmei Wang, Jiazhou MRI-based radiomics signature is a quantitative prognostic biomarker for nasopharyngeal carcinoma |
title | MRI-based radiomics signature is a quantitative prognostic biomarker for nasopharyngeal carcinoma |
title_full | MRI-based radiomics signature is a quantitative prognostic biomarker for nasopharyngeal carcinoma |
title_fullStr | MRI-based radiomics signature is a quantitative prognostic biomarker for nasopharyngeal carcinoma |
title_full_unstemmed | MRI-based radiomics signature is a quantitative prognostic biomarker for nasopharyngeal carcinoma |
title_short | MRI-based radiomics signature is a quantitative prognostic biomarker for nasopharyngeal carcinoma |
title_sort | mri-based radiomics signature is a quantitative prognostic biomarker for nasopharyngeal carcinoma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6639299/ https://www.ncbi.nlm.nih.gov/pubmed/31320729 http://dx.doi.org/10.1038/s41598-019-46985-0 |
work_keys_str_mv | AT mingxue mribasedradiomicssignatureisaquantitativeprognosticbiomarkerfornasopharyngealcarcinoma AT oeironaldwihal mribasedradiomicssignatureisaquantitativeprognosticbiomarkerfornasopharyngealcarcinoma AT zhairuiping mribasedradiomicssignatureisaquantitativeprognosticbiomarkerfornasopharyngealcarcinoma AT kongfangfang mribasedradiomicssignatureisaquantitativeprognosticbiomarkerfornasopharyngealcarcinoma AT duchengrun mribasedradiomicssignatureisaquantitativeprognosticbiomarkerfornasopharyngealcarcinoma AT huchaosu mribasedradiomicssignatureisaquantitativeprognosticbiomarkerfornasopharyngealcarcinoma AT huweigang mribasedradiomicssignatureisaquantitativeprognosticbiomarkerfornasopharyngealcarcinoma AT zhangzhen mribasedradiomicssignatureisaquantitativeprognosticbiomarkerfornasopharyngealcarcinoma AT yinghongmei mribasedradiomicssignatureisaquantitativeprognosticbiomarkerfornasopharyngealcarcinoma AT wangjiazhou mribasedradiomicssignatureisaquantitativeprognosticbiomarkerfornasopharyngealcarcinoma |