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Hand2 Selectively Reorganizes Chromatin Accessibility to Induce Pacemaker-like Transcriptional Reprogramming

Gata4, Hand2, Mef2c, and Tbx5 (GHMT) can reprogram transduced fibroblasts into induced pacemaker-like myocytes (iPMs), but the underlying mechanisms remain obscure. Here, we explore the role of Hand2 in iPM formation by using a combination of transcriptome, genome, and biochemical as-says. We found...

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Autores principales: Fernandez-Perez, Antonio, Sathe, Adwait Amod, Bhakta, Minoti, Leggett, Kayla, Xing, Chao, Munshi, Nikhil Vilas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6657359/
https://www.ncbi.nlm.nih.gov/pubmed/31116981
http://dx.doi.org/10.1016/j.celrep.2019.04.077
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author Fernandez-Perez, Antonio
Sathe, Adwait Amod
Bhakta, Minoti
Leggett, Kayla
Xing, Chao
Munshi, Nikhil Vilas
author_facet Fernandez-Perez, Antonio
Sathe, Adwait Amod
Bhakta, Minoti
Leggett, Kayla
Xing, Chao
Munshi, Nikhil Vilas
author_sort Fernandez-Perez, Antonio
collection PubMed
description Gata4, Hand2, Mef2c, and Tbx5 (GHMT) can reprogram transduced fibroblasts into induced pacemaker-like myocytes (iPMs), but the underlying mechanisms remain obscure. Here, we explore the role of Hand2 in iPM formation by using a combination of transcriptome, genome, and biochemical as-says. We found many shared transcriptional signatures between iPMs and the endogenous sinoatrial node (SAN), yet key regulatory networks remain missing. We demonstrate that Hand2 augments chromatin accessibility at loci involved in sarcomere organization, electrical coupling, and membrane depolarization. Focusing on an established cardiac Hand2 cistrome, we observe selective reorganization of chromatin accessibility to promote pacemaker-specific gene expression. Moreover, we identify a Hand2 cardiac subtype diversity (CSD) domain through biochemical analysis of the N terminus. By integrating our RNA-seq and ATAC-seq datasets, we highlight desmosome organization as a hallmark feature of iPM formation. Collectively, our results illuminate Hand2-dependent mechanisms that may guide future efforts to rationally improve iPM formation.
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spelling pubmed-66573592019-07-25 Hand2 Selectively Reorganizes Chromatin Accessibility to Induce Pacemaker-like Transcriptional Reprogramming Fernandez-Perez, Antonio Sathe, Adwait Amod Bhakta, Minoti Leggett, Kayla Xing, Chao Munshi, Nikhil Vilas Cell Rep Article Gata4, Hand2, Mef2c, and Tbx5 (GHMT) can reprogram transduced fibroblasts into induced pacemaker-like myocytes (iPMs), but the underlying mechanisms remain obscure. Here, we explore the role of Hand2 in iPM formation by using a combination of transcriptome, genome, and biochemical as-says. We found many shared transcriptional signatures between iPMs and the endogenous sinoatrial node (SAN), yet key regulatory networks remain missing. We demonstrate that Hand2 augments chromatin accessibility at loci involved in sarcomere organization, electrical coupling, and membrane depolarization. Focusing on an established cardiac Hand2 cistrome, we observe selective reorganization of chromatin accessibility to promote pacemaker-specific gene expression. Moreover, we identify a Hand2 cardiac subtype diversity (CSD) domain through biochemical analysis of the N terminus. By integrating our RNA-seq and ATAC-seq datasets, we highlight desmosome organization as a hallmark feature of iPM formation. Collectively, our results illuminate Hand2-dependent mechanisms that may guide future efforts to rationally improve iPM formation. 2019-05-21 /pmc/articles/PMC6657359/ /pubmed/31116981 http://dx.doi.org/10.1016/j.celrep.2019.04.077 Text en This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Fernandez-Perez, Antonio
Sathe, Adwait Amod
Bhakta, Minoti
Leggett, Kayla
Xing, Chao
Munshi, Nikhil Vilas
Hand2 Selectively Reorganizes Chromatin Accessibility to Induce Pacemaker-like Transcriptional Reprogramming
title Hand2 Selectively Reorganizes Chromatin Accessibility to Induce Pacemaker-like Transcriptional Reprogramming
title_full Hand2 Selectively Reorganizes Chromatin Accessibility to Induce Pacemaker-like Transcriptional Reprogramming
title_fullStr Hand2 Selectively Reorganizes Chromatin Accessibility to Induce Pacemaker-like Transcriptional Reprogramming
title_full_unstemmed Hand2 Selectively Reorganizes Chromatin Accessibility to Induce Pacemaker-like Transcriptional Reprogramming
title_short Hand2 Selectively Reorganizes Chromatin Accessibility to Induce Pacemaker-like Transcriptional Reprogramming
title_sort hand2 selectively reorganizes chromatin accessibility to induce pacemaker-like transcriptional reprogramming
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6657359/
https://www.ncbi.nlm.nih.gov/pubmed/31116981
http://dx.doi.org/10.1016/j.celrep.2019.04.077
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