Cargando…
A model of pulldown alignments from SssI-treated DNA improves DNA methylation prediction
BACKGROUND: Protein pulldown using Methyl-CpG binding domain (MBD) proteins followed by high-throughput sequencing is a common method to determine DNA methylation. Algorithms have been developed to estimate absolute methylation level from read coverage generated by affinity enrichment-based techniqu...
Autores principales: | Moreland, Blythe S., Oman, Kenji M., Bundschuh, Ralf |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6700779/ https://www.ncbi.nlm.nih.gov/pubmed/31426747 http://dx.doi.org/10.1186/s12859-019-3011-2 |
Ejemplares similares
-
Cytosine-to-Uracil Deamination by SssI DNA Methyltransferase
por: Stier, Ildikó, et al.
Publicado: (2013) -
Ectopic targeting of CG DNA methylation in Arabidopsis with the bacterial SssI methyltransferase
por: Liu, Wanlu, et al.
Publicado: (2021) -
Complementation between inactive fragments of SssI DNA methyltransferase
por: Ślaska-Kiss, Krystyna, et al.
Publicado: (2012) -
Lowering DNA binding affinity of SssI DNA methyltransferase does not enhance the specificity of targeted DNA methylation in E. coli
por: Ślaska-Kiss, Krystyna, et al.
Publicado: (2021) -
Novel SNP markers in InvGE and SssI genes are associated with natural variation of sugar contents and frying color in Solanum tuberosum Group Phureja
por: Duarte-Delgado, Diana, et al.
Publicado: (2017)