Comparison of single-nucleotide variants identified by Illumina and Oxford Nanopore technologies in the context of a potential outbreak of Shiga toxin–producing Escherichia coli

BACKGROUND: We aimed to compare Illumina and Oxford Nanopore Technology sequencing data from the 2 isolates of Shiga toxin–producing Escherichia coli (STEC) O157:H7 to determine whether concordant single-nucleotide variants were identified and whether inference of relatedness was consistent with the...

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Detalles Bibliográficos
Autores principales: Greig, David R, Jenkins, Claire, Gharbia, Saheer, Dallman, Timothy J
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6703438/
https://www.ncbi.nlm.nih.gov/pubmed/31433830
http://dx.doi.org/10.1093/gigascience/giz104

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6703438/
https://www.ncbi.nlm.nih.gov/pubmed/31433830
http://dx.doi.org/10.1093/gigascience/giz104

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