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Whole‐exome sequencing and immunohistochemistry findings in von Hippel–Lindau disease

BACKGROUND: von Hippel–Lindau (VHL) disease has a hereditary, autosomal dominant pattern, and multiple tumors can develop in multiple organs of a single patient. However, the exact mechanisms of tumorigenesis are unclear, and further studies are needed to clarify whether the same signaling pathways...

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Autores principales: Guo, Xiaopeng, Gao, Lu, Hong, Xiafei, Guo, Dan, Di, Wenyu, Wang, Xiaoman, Xu, Zhiqin, Xing, Bing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6732316/
https://www.ncbi.nlm.nih.gov/pubmed/31317677
http://dx.doi.org/10.1002/mgg3.880
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author Guo, Xiaopeng
Gao, Lu
Hong, Xiafei
Guo, Dan
Di, Wenyu
Wang, Xiaoman
Xu, Zhiqin
Xing, Bing
author_facet Guo, Xiaopeng
Gao, Lu
Hong, Xiafei
Guo, Dan
Di, Wenyu
Wang, Xiaoman
Xu, Zhiqin
Xing, Bing
author_sort Guo, Xiaopeng
collection PubMed
description BACKGROUND: von Hippel–Lindau (VHL) disease has a hereditary, autosomal dominant pattern, and multiple tumors can develop in multiple organs of a single patient. However, the exact mechanisms of tumorigenesis are unclear, and further studies are needed to clarify whether the same signaling pathways are involved in different VHL‐related tumors. METHODS: Whole‐exome sequencing (WES) of tumor and paired peripheral blood samples were performed for a VHL disease pedigree. A bioinformatics analysis was conducted to identify candidate somatic single‐nucleotide variants (SNVs) present in all tumor tissues. Sanger sequencing was then used to validate the SNVs identified using WES. Immunohistochemistry was performed to analyze components of the mTOR pathway, which was abnormally activated in tumor tissues. RESULTS: Two hemangioblastomas and two renal cell carcinomas were sequenced. The bioinformatics analysis revealed a VHL somatic variant in all tumors; no other SNV was detected. Immunohistochemistry showed the abnormal expression of the phospho‐S6 ribosomal protein in the hemangioblastomas, but not in the renal clear cell carcinomas. CONCLUSION: Except for a SNV in the VHL gene, no other somatic SNVs were detected using WES. The phospho‐S6 ribosomal protein in the mTOR pathway is a potential target in VHL‐related cerebellum hemangioblastomas.
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spelling pubmed-67323162019-09-12 Whole‐exome sequencing and immunohistochemistry findings in von Hippel–Lindau disease Guo, Xiaopeng Gao, Lu Hong, Xiafei Guo, Dan Di, Wenyu Wang, Xiaoman Xu, Zhiqin Xing, Bing Mol Genet Genomic Med Original Articles BACKGROUND: von Hippel–Lindau (VHL) disease has a hereditary, autosomal dominant pattern, and multiple tumors can develop in multiple organs of a single patient. However, the exact mechanisms of tumorigenesis are unclear, and further studies are needed to clarify whether the same signaling pathways are involved in different VHL‐related tumors. METHODS: Whole‐exome sequencing (WES) of tumor and paired peripheral blood samples were performed for a VHL disease pedigree. A bioinformatics analysis was conducted to identify candidate somatic single‐nucleotide variants (SNVs) present in all tumor tissues. Sanger sequencing was then used to validate the SNVs identified using WES. Immunohistochemistry was performed to analyze components of the mTOR pathway, which was abnormally activated in tumor tissues. RESULTS: Two hemangioblastomas and two renal cell carcinomas were sequenced. The bioinformatics analysis revealed a VHL somatic variant in all tumors; no other SNV was detected. Immunohistochemistry showed the abnormal expression of the phospho‐S6 ribosomal protein in the hemangioblastomas, but not in the renal clear cell carcinomas. CONCLUSION: Except for a SNV in the VHL gene, no other somatic SNVs were detected using WES. The phospho‐S6 ribosomal protein in the mTOR pathway is a potential target in VHL‐related cerebellum hemangioblastomas. John Wiley and Sons Inc. 2019-07-17 /pmc/articles/PMC6732316/ /pubmed/31317677 http://dx.doi.org/10.1002/mgg3.880 Text en © 2019 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Guo, Xiaopeng
Gao, Lu
Hong, Xiafei
Guo, Dan
Di, Wenyu
Wang, Xiaoman
Xu, Zhiqin
Xing, Bing
Whole‐exome sequencing and immunohistochemistry findings in von Hippel–Lindau disease
title Whole‐exome sequencing and immunohistochemistry findings in von Hippel–Lindau disease
title_full Whole‐exome sequencing and immunohistochemistry findings in von Hippel–Lindau disease
title_fullStr Whole‐exome sequencing and immunohistochemistry findings in von Hippel–Lindau disease
title_full_unstemmed Whole‐exome sequencing and immunohistochemistry findings in von Hippel–Lindau disease
title_short Whole‐exome sequencing and immunohistochemistry findings in von Hippel–Lindau disease
title_sort whole‐exome sequencing and immunohistochemistry findings in von hippel–lindau disease
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6732316/
https://www.ncbi.nlm.nih.gov/pubmed/31317677
http://dx.doi.org/10.1002/mgg3.880
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