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rnaSPAdes: a de novo transcriptome assembler and its application to RNA-Seq data

BACKGROUND: The possibility of generating large RNA-sequencing datasets has led to development of various reference-based and de novo transcriptome assemblers with their own strengths and limitations. While reference-based tools are widely used in various transcriptomic studies, their application is...

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Detalles Bibliográficos
Autores principales: Bushmanova, Elena, Antipov, Dmitry, Lapidus, Alla, Prjibelski, Andrey D
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6736328/
https://www.ncbi.nlm.nih.gov/pubmed/31494669
http://dx.doi.org/10.1093/gigascience/giz100